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Data associated with selected splice site

Sequence

 atgc   intronic sequence     ATGC   exonic sequence

TGAGGTTGTTTCCCATGTCACTGGTAGATACCCCAATGCTAATGTATATGCCATAGGGTGGTCACTTGGGGCCAACATTCTTGTTCGTTACTTGGGTCAGgtaccattgttgctcattcctgcgttaatttgtttgtcctgcaaaagaaataatgctttgtgttaattttattttggtccgtggttttttatttttgaagtttatgttcattaggctagtgatttctatatagctaggtttttccattgtattccacgtcttccatgttatatatatttttcatttgccactttcag

Basic information

species Glycine max
transcript GLYMA12G01650.1
intron # 3
splice site 5'
intron type U2

Mapped EST sequences

Showing partial alignments of ESTs and genomic sequences. See full alignments


 ATGC     EST sequence
 ATGC     genomic sequence (exon)
 ATGC     genomic sequence (truncated intron)


EST: gi|11413345|gb|BF425356.1|BF425356
EST:     CCATANGGTGGTCACTTGGGGCCAACATTCTTGTTCATTACTTGGGTCAA                         GAATCACACAATTGTCCACTGTCTAGTGCTGTATCATTATATAATCCTTTC
genomic: CCATAGGGTGGTCACTTGGGGCCAACATTCTTGTTCGTTACTTGGGTCAGgtaccattgt ... ccactttcagGAATCGCACAATTGTCCACTTTCTGGTGCTGTATCGTTGTGTAATCCTTTC
EST: gi|209717157|gb|BW657620.1|BW657620
EST:     CCATAGGGTGGTCACTTGGGGCCAACATTCTTGTTCGTTACTTGGGTCAG                         GAATCGCACAATTGTCCACTTTCTGGTGCTGTATCGTTGTGTAATCCTTTC
genomic: CCATAGGGTGGTCACTTGGGGCCAACATTCTTGTTCGTTACTTGGGTCAGgtaccattgt ... ccactttcagGAATCGCACAATTGTCCACTTTCTGGTGCTGTATCGTTGTGTAATCCTTTC