1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' | 7 5' 3' | 8 5' 3' | 9 5' 3' | 10 5' 3' |
GAAATTCCAGAGCCTTTCCCTCTTCCAACTGAAGTGACTATTGTAAAAGCTGCAGCTGGATGGGCACATTGTGTTTCTGTGACAGgtaaggttcatttacttatcttgcttgaaaaggaagggacatagtgtgattgaaaggggaagggataaaataataaaatcaaattgaattggcagtattg...
species | Glycine max |
transcript | GLYMA11G34470.1 |
intron # | 3 |
splice site | 5' |
intron type | U2 |
EST: GACTATTGTAAAAGCTGCAGCTGGATGGGCACATTGTGTTTCTGTGACAG ATTGTGGAGAAEST: gi|11273888|gb|BF324277.1|BF324277
genomic: GACTATTGTAAAAGCTGCAGCTGGATGGGCACATTGTGTTTCTGTGACAGgtaaggttca ... tcctatgcagATTGTGGAGAA
EST: GACTATTGTAAAAGCTGCAGCTGGATGGGCACATTGTGTTTCTGTGACAG ATTGTGGAGAAGTTTACACATGGGGATGGAGGGAATGTGTACCCTCTGGGAEST: gi|193321528|gb|FK286588.1|FK286588
genomic: GACTATTGTAAAAGCTGCAGCTGGATGGGCACATTGTGTTTCTGTGACAGgtaaggttca ... tcctatgcagATTGTGGAGAAGTTTACACATGGGGATGGAGGGAATGTGTACCCTCTGGGA
EST: GACTATTGTAAAAGCTGCAGCTGGATGGGCACATTGTGTTTCTGTGACAG ATTGTGGAGAA
genomic: GACTATTGTAAAAGCTGCAGCTGGATGGGCACATTGTGTTTCTGTGACAGgtaaggttca ... tcctatgcagATTGTGGAGAA
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| GAAATTCCAGAGCCTTTCCCTCTTCCAACTGAAGTGACTATTGTAAAAGCTGCAGCTGGATGGGCACATTGTGTTTCTGTGACAGgtaaggttcatttacttatcttgcttgaaaaggaagggacatagtgtgattgaaaggggaagggataaaataataaaatcaaattgaattggcagtattg
- - - - - - - - - - - - - - - - - - - - - - - AAGCTG
- - - - - - - - - - - - - - - - - - - - - - - AGCTGC
- - - - - - - - - - - - - - - - - - - - - - - - CTGCAG
- - - - - - - - - - - - - - - - - - - - - - - - - GCAGCT
- - - - - - - - - - - - - - - - - - - - - - - - - - CAGCTG
- - - - - - - - - - - - - - - - - - - - - - - - - - - GCTGGA