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Data associated with selected splice site

Sequence

 atgc   intronic sequence     ATGC   exonic sequence

CGCGTTCATGCAACACGTCCTAGTAATTCCAATTCACTCACTTTTCTCGTGACAGgtattaatgtactcatattatgtttgtttttatcactttttgtgaatatgttttttctttcccttatattgcatgcaatgtccctcccatttacgccttactgcttgtatgtttcag

Basic information

species Glycine max
transcript GLYMA11G34130.2
intron # 3
splice site 5'
intron type U2

Mapped EST sequences

Showing partial alignments of ESTs and genomic sequences. See full alignments


 ATGC     EST sequence
 ATGC     genomic sequence (exon)
 ATGC     genomic sequence (truncated intron)


EST: gi|151399017|gb|EV268888.1|EV268888
EST:     TCATGCAACACGTCCTAGTAATTCCAATTCACTCACTTTTCTCGTGACAG                         TTCTTCTGTTATTCATGATACTGAACTCTCACCAGATGTCCCCAAACTTTC
genomic: TCATGCAACACGTCCTAGTAATTCCAATTCACTCACTTTTCTCGTGACAGgtattaatgt ... tatgtttcagTTCTTCTGTTATTCATGATACTGAACTCTCACCAGATGTCCCCAAACTTTC
EST: gi|192299785|gb|FG987801.1|FG987801
EST:     TCATGCAACACGTCCTAGTAATTCCAATTCACTCACTTTTCTCGTGACAG                         TTCTTCTGTTATTCATGATACTGAACTCTCACCAGATGTCCCCAAACTTTC
genomic: TCATGCAACACGTCCTAGTAATTCCAATTCACTCACTTTTCTCGTGACAGgtattaatgt ... tatgtttcagTTCTTCTGTTATTCATGATACTGAACTCTCACCAGATGTCCCCAAACTTTC
EST: gi|151409236|gb|EV279044.1|EV279044
EST:     TCATGCAACACGTCCTAGTAATTCCACTTCACTCACTTTTCCCGTGACAG                         TTCTTCTGTTATTCATGATACTGAACTCTCACCAGATGTCCCCAAACTTTC
genomic: TCATGCAACACGTCCTAGTAATTCCAATTCACTCACTTTTCTCGTGACAGgtattaatgt ... tatgtttcagTTCTTCTGTTATTCATGATACTGAACTCTCACCAGATGTCCCCAAACTTTC
EST: gi|9899003|gb|BE607971.1|BE607971
EST:     TCATGCAACACGTCCTAGTAATTCCAATTCACTCACTTTTCTCGTGACAG                         TTCTTCTGTTATTCATGATACTGAACTCTCACCAGATGTCCCCAAACTTTC
genomic: TCATGCAACACGTCCTAGTAATTCCAATTCACTCACTTTTCTCGTGACAGgtattaatgt ... tatgtttcagTTCTTCTGTTATTCATGATACTGAACTCTCACCAGATGTCCCCAAACTTTC