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Data associated with selected splice site

Sequence

 atgc   intronic sequence     ATGC   exonic sequence

TGGTTCGGAGTCGTGGAATTACTGCAGGAATGACACCACCTCCACGCTATGTGTCACGAGTCTGCTCTGTCATTTGTGCCTTGATGCCATTGTTTGTCATgtaagattggttagtctgccttatttttccattagcacttgcattttgctagcaatcatgtgcattaacagtgaaaagttattgatatttgttttatatg...

Basic information

species Glycine max
transcript GLYMA11G30030.2
intron # 3
splice site 5'
intron type U2

Orthologous splice sites


 atgc   intronic sequence     ATGC   exonic sequence


upper sequence: GLYMA11G30030.2 (Glycine max), 5'ss of exon 3
lower sequence: Vv15s0048g00240.t01 (Vitis vinifera), 5'ss of exon 2
TGGTTCGGAGTCGTGGAATTACTGCAGGAATGACACCACCTCCACGCTATGTGTCACGAGTCTGCTCTGTCATTTGTGCCTTGATGCCATTGTTTGTCATgtaagattggttagtctgccttatttttccattagcacttgcattttgctagcaatcatgtgcattaacagtgaaaagttattgatatttgttttatatg--
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TGGTTAGAAGTCATGGAATTACTGCAGGAATGACACCTCCTCCTCGATATGTGTCACGAGTTTGCTCTGTTATCTGTGCTGTCATGCCGTTACTTACACTgtaagattcattaataatatttattcttatcggaacaaa-atgtagctcctgttataccctgtaatttcatttctgaattctt-atctttcactactagaat