1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' | 7 5' 3' | 8 5' 3' | 9 5' 3' | 10 5' 3' | 11 5' 3' | 12 5' 3' | 13 5' 3' | 14 5' 3' |
GAGGTGAACTTATGGAAAAGCATGGGGGAATTTAATCTCCTTGGGATTACTGCACCAGgtagtttatttttcttgcttcactgcttccattttctgatatgtcaaaagaatttcttttttagatttgtaagctgttggtgttatctgttactgtggct...
species | Glycine max |
transcript | GLYMA11G15900.1 |
intron # | 3 |
splice site | 5' |
intron type | U2 |
EST: CTTATGGAAAAGCATGGGGGAATTTAATCTCCTTGGGATTACTGCACCAG AGGAATATGGAGGGCTTGGCCTAGGTTACTTGTATCACTGTATAGCAATGGEST: gi|213600672|gb|DB956190.1|DB956190
genomic: CTTATGGAAAAGCATGGGGGAATTTAATCTCCTTGGGATTACTGCACCAGgtagtttatt ... ttatttgcagAGGAATATGGAGGGCTTGGCCTAGGTTACTTGTATCACTGTATAGCAATGG
EST: CTTATGGAAAAGCATGGGGGAATTTAATCTCCTTGGGATTACTGCACCAG AGGAATATGGAGGGCTTGGCCTAGGTTACTTGTATCACTGTATAGCAATGGEST: gi|298198477|gb|HO040016.1|HO040016
genomic: CTTATGGAAAAGCATGGGGGAATTTAATCTCCTTGGGATTACTGCACCAGgtagtttatt ... ttatttgcagAGGAATATGGAGGGCTTGGCCTAGGTTACTTGTATCACTGTATAGCAATGG
EST: CTTATGGAAAAGCATGGGGGAATTTAATCTCCTTGGGATTACTGCACCAG AGGAATATGGAGGGCTTGGCCTAGGTTACTTGTATCACTGTATAGCAATGGEST: gi|209712354|gb|BW671206.1|BW671206
genomic: CTTATGGAAAAGCATGGGGGAATTTAATCTCCTTGGGATTACTGCACCAGgtagtttatt ... ttatttgcagAGGAATATGGAGGGCTTGGCCTAGGTTACTTGTATCACTGTATAGCAATGG
EST: CTTATGGAAAAGCATGGGGGAATTTAATCTCCTTGGGATTACTGCACCAG AGGAATATGGAGGGCTTGGCCTAGGTTACTTGTATCACTGTATAGCAATGGEST: gi|15663805|gb|BI701176.1|BI701176
genomic: CTTATGGAAAAGCATGGGGGAATTTAATCTCCTTGGGATTACTGCACCAGgtagtttatt ... ttatttgcagAGGAATATGGAGGGCTTGGCCTAGGTTACTTGTATCACTGTATAGCAATGG
EST: CTTATGGAAAAGCATGGGGGAATTTAATCTCCTTGGGATTACTGCACCAG AGGAATATGGAGGGCTTGGCCTAGGTTACTTGTATCACTGTATAGCAATGG
genomic: CTTATGGAAAAGCATGGGGGAATTTAATCTCCTTGGGATTACTGCACCAGgtagtttatt ... ttatttgcagAGGAATATGGAGGGCTTGGCCTAGGTTACTTGTATCACTGTATAGCAATGG
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| GAGGTGAACTTATGGAAAAGCATGGGGGAATTTAATCTCCTTGGGATTACTGCACCAGgtagtttatttttcttgcttcactgcttccattttctgatatgtcaaaagaatttcttttttagatttgtaagctgttggtgttatctgttactgtggct
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