1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' | 7 5' 3' | 8 5' 3' | 9 5' 3' | 10 5' 3' |
GTTGAATCTACACTAGCTATGCAAAATCTTCAACCAAAAATTAAGGCCATTCAAGATAGATATGCTGGCAATCAGgtgagggatgttgttggttattaggcatccagtttgatctcgagtaaatattgattttgttgtatgttaaaacaaaagcattgttctttctaaactattcattttgttgccctctttttaag
species | Glycine max |
transcript | GLYMA11G14960.1 |
intron # | 3 |
splice site | 5' |
intron type | U2 |
EST: ATCTTCAACCAAAAATTAAGGCCATTCAAGATAGATATGCTGGCAATCAG GAAAGAATACAACTTGAGACGTCAAGGCTATATCGGCAGGCTGGGGTTAACEST: gi|14258971|gb|BG881879.1|BG881879
genomic: ATCTTCAACCAAAAATTAAGGCCATTCAAGATAGATATGCTGGCAATCAGgtgagggatg ... tctttttaagGAAAGAATACAACTTGAGACGTCAAGGCTATATCGGCAGGCTGGGGTTAAC
EST: ATCTTCAACCAAAAATTAAGGCCATTCAAGATAGATATGCTGGCAATCAG GAAAGAATACAACTTGAGACGTCAAGGCTATATCGGCAGGCTGGGGTTAACEST: gi|10235360|gb|BE804248.1|BE804248
genomic: ATCTTCAACCAAAAATTAAGGCCATTCAAGATAGATATGCTGGCAATCAGgtgagggatg ... tctttttaagGAAAGAATACAACTTGAGACGTCAAGGCTATATCGGCAGGCTGGGGTTAAC
EST: ATCTTCAACCATAGATTAAGGCCATTCATGATAGATATGCTGGCAATCAG GAAAGAATACAACTAGAGACGTCAAGGCTATTATCG-CAGG-TGGGGTTAEST: gi|208284429|gb|GE085047.1|GE085047
genomic: ATCTTCAACCAAAAATTAAGGCCATTCAAGATAGATATGCTGGCAATCAGgtgagggatg ... tctttttaagGAAAGAATACAACTTGAGACGTCAAGGCTAT-ATCGGCAGGCTGGGGTTA
EST: AGATATGCTGGCAATCAG GAAAGAATACAACTTGAGACGTCAAGGCTATATCGGCAGGCTGGGGTTAACEST: gi|209708316|gb|BW683906.1|BW683906
genomic: AGATATGCTGGCAATCAGgtgagggatg ... tctttttaagGAAAGAATACAACTTGAGACGTCAAGGCTATATCGGCAGGCTGGGGTTAAC
EST: ATCTTCAACCAAAAATTAAGGCCATTCAAGATAGATATGCTGGCAATCAG GAAAGAA-ACAACTTGAGACGTCAAGGCTATATCGGCAGGCTGGGGTTA
genomic: ATCTTCAACCAAAAATTAAGGCCATTCAAGATAGATATGCTGGCAATCAGgtgagggatg ... tctttttaagGAAAGAATACAACTTGAGACGTCAAGGCTATATCGGCAGGCTGGGGTTA
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| GTTGAATCTACACTAGCTATGCAAAATCTTCAACCAAAAATTAAGGCCATTCAAGATAGATATGCTGGCAATCAGgtgagggatgttgttggttattaggcatccagtttgatctcgagtaaatattgattttgttgtatgttaaaacaaaagcattgttctttctaaactattcattttgttgccctctttttaag
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