1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' | 7 5' 3' | 8 5' 3' |
TATATGAAAATATATAGACATAGATGGACTGGAAGGTATGAAGCTCACCTTTGGGATAATAGCTGTAGAAGGGAAGGGCAATCAAGAAAAGGACGCCAAGgtgattaaacttcaaattaattaattacttttagatttttattcatctttttctttgaagttgtttaggtaatattattaattgggagttttattaacacatttttcttaaatgttttgcttatgtacatatttcttctcaactttcattcag
species | Glycine max |
transcript | GLYMA11G14040.1 |
intron # | 3 |
splice site | 5' |
intron type | U2 |
EST: AATAGCTGTAGAAGGGAAGGGCAATCAAGAAAAGGACGCCAAG TTTATTTGGEST: gi|24205644|gb|BU964897.1|BU964897
genomic: AATAGCTGTAGAAGGGAAGGGCAATCAAGAAAAGGACGCCAAGgtgattaaac ... tttcattcagTTTATTTGG
EST: TTGGGATAATAGCTGTAGAAGGGAAGGGCAATCAAGAAAAGGACGCCAAG TTTATTTGGEST: gi|17023082|gb|BM094116.1|BM094116
genomic: TTGGGATAATAGCTGTAGAAGGGAAGGGCAATCAAGAAAAGGACGCCAAGgtgattaaac ... tttcattcagTTTATTTGG
EST: TTGGGATAATAGCTGTAGAAGGGAAGGGCAATCAAGAAAAGGACGCCAAG TTTATTTGG
genomic: TTGGGATAATAGCTGTAGAAGGGAAGGGCAATCAAGAAAAGGACGCCAAGgtgattaaac ... tttcattcagTTTATTTGG
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| TATATGAAAATATATAGACATAGATGGACTGGAAGGTATGAAGCTCACCTTTGGGATAATAGCTGTAGAAGGGAAGGGCAATCAAGAAAAGGACGCCAAGgtgattaaacttcaaattaattaattacttttagatttttattcatctttttctttgaagttgtttaggtaatattattaattgggagttttattaacacatttttcttaaatgttttgcttatgtacatatttcttctcaactttcattcag
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