1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' |
ATATATGTTGTTGATAGTCTGGACCGCGAAAGGATAGGGAAAGCAAAGCAGGAATTTCAGgtgataaaatcaaaatgtgtacacatacaccatgttattccaaacagattttgaatagatctatggattacttgcag
species | Glycine max |
transcript | GLYMA11G09790.3 |
intron # | 3 |
splice site | 5' |
intron type | U2 |
EST: TTGATAGTCTGGACCGCGAAAGGATAGGGAAAGCAAAGCAGGAATTTCAG ACAATCATAAATGATCCATTTATGCTCCACAGTATCATCTTGGTGTTTGCCEST: gi|23729125|gb|BU762647.1|BU762647
genomic: TTGATAGTCTGGACCGCGAAAGGATAGGGAAAGCAAAGCAGGAATTTCAGgtgataaaat ... ttacttgcagACAATCATAAATGATCCATTTATGCTCCACAGTATCATCTTGGTGTTTGCC
EST: TTGATAGTCTGGACCGCGAAAGGATAGGGAAAGCAAAGCAGGAATTTCAG ACAATCATAAATGATCCATTTATGCTCCACAGTATCATCTTGGTGTTTGTCEST: gi|192303487|gb|FG995921.1|FG995921
genomic: TTGATAGTCTGGACCGCGAAAGGATAGGGAAAGCAAAGCAGGAATTTCAGgtgataaaat ... ttacttgcagACAATCATAAATGATCCATTTATGCTCCACAGTATCATCTTGGTGTTTGCC
EST: TTGATAGTCTGGACCGCGAAAGGATAGGGAAAGCAAAGCAGGAATTTCAG ACAATCATAAATGATCCATTTATGCTCCACAGTATCATCTTGGTGTTTGCCEST: gi|192334432|gb|FK024447.1|FK024447
genomic: TTGATAGTCTGGACCGCGAAAGGATAGGGAAAGCAAAGCAGGAATTTCAGgtgataaaat ... ttacttgcagACAATCATAAATGATCCATTTATGCTCCACAGTATCATCTTGGTGTTTGCC
EST: TTGATAGTCTGGACCGCGAAAGGATAGGGAAAGCAAAGCAGGAATTTCAG ACAATCATAAATGATCCATTTATGCTCCACAGTATCATCTTGGTGTTTGCCEST: gi|58015262|gb|CX702004.1|CX702004
genomic: TTGATAGTCTGGACCGCGAAAGGATAGGGAAAGCAAAGCAGGAATTTCAGgtgataaaat ... ttacttgcagACAATCATAAATGATCCATTTATGCTCCACAGTATCATCTTGGTGTTTGCC
EST: TTGATAGTCTGGACCGCGAAAGGATAGGGAAAGCAAAGCAGGAATTTCAG ACAATCATAAATGATCCATTTATGCTCCACAGTATCATCTTGGTGTTTGCCEST: gi|14259783|gb|BG882691.1|BG882691
genomic: TTGATAGTCTGGACCGCGAAAGGATAGGGAAAGCAAAGCAGGAATTTCAGgtgataaaat ... ttacttgcagACAATCATAAATGATCCATTTATGCTCCACAGTATCATCTTGGTGTTTGCC
EST: TTGATAGTCTGGACCGCGAAAGGATAGGGAAAGCAAAGCAGGAATTTCAG ACAATCATAAATGATCCATTTATGCTCCACAGTATCATCTTGGTGTTTGCCEST: gi|21479719|gb|BQ576402.1|BQ576402
genomic: TTGATAGTCTGGACCGCGAAAGGATAGGGAAAGCAAAGCAGGAATTTCAGgtgataaaat ... ttacttgcagACAATCATAAATGATCCATTTATGCTCCACAGTATCATCTTGGTGTTTGCC
EST: TTGATAGTCTGGACCGCGAAAGGATAGGGAAAGCAAAGCAGGAATTTCAG ACAATCATAAATGATCCATTTATGCTCCACAGTATCATCTTGGTGTTTGCC
genomic: TTGATAGTCTGGACCGCGAAAGGATAGGGAAAGCAAAGCAGGAATTTCAGgtgataaaat ... ttacttgcagACAATCATAAATGATCCATTTATGCTCCACAGTATCATCTTGGTGTTTGCC
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| ATATATGTTGTTGATAGTCTGGACCGCGAAAGGATAGGGAAAGCAAAGCAGGAATTTCAGgtgataaaatcaaaatgtgtacacatacaccatgttattccaaacagattttgaatagatctatggattacttgcag
- - - - - - - - - - - - - - - - - - - - AAGCAA
- - - - - - - - - - - - - - - - - - - - - GCAAAG