1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' | 7 5' 3' |
GGACAAAGGATTAGGGAATGCCAATTCTGATGAAATCAACAATGAAAGCAAGCATAGAAGTTCAGAATCAGCAACTGACTGTCAAGATAAGGTTCAGAAGgtgtgactaatctgtattattaggccattagcaactaatcattttctcttttttgttctctatatttccctttttcttaaggggtatatgaatttgtctcacactccctcattctgtccccccctcccctgcccccaaaatctacag
species | Glycine max |
transcript | GLYMA11G02560.1 |
intron # | 3 |
splice site | 5' |
intron type | U2 |
EST: TGACTGTCAAGATAAGGTTCAGAAG AGTTTCAAGTCTTTTAACTGGCCAGATGTTGCTGTTTCAGCCATGGTTGCTEST: gi|7691555|gb|AW759680.1|AW759680
genomic: TGACTGTCAAGATAAGGTTCAGAAGgtgtgactaa ... aaatctacagAGTTCCAAGTCTTTTAACTGGCCAGATGTTGCTGTTTCAGCCATGGTTGCT
EST: AGCATAGAAGTTCAGAATCAGCAACTGACTGTCAAGATAAGGTTCAGAAG AGTTCCAAGTCTTTTAACTGGCCAGATGTTGCTGTTTCAGCCATGGTTGCTEST: gi|14008792|gb|BG725396.1|BG725396
genomic: AGCATAGAAGTTCAGAATCAGCAACTGACTGTCAAGATAAGGTTCAGAAGgtgtgactaa ... aaatctacagAGTTCCAAGTCTTTTAACTGGCCAGATGTTGCTGTTTCAGCCATGGTTGCT
EST: TAGAAGTTCAGAATCAGCAACTGACTGTCAAGATAAGGTTCAGAAG AGTTCCAAGTCTTTTAACTGGCCAGATGTTGCTGTTTCAGCCATGGTTGCT
genomic: TAGAAGTTCAGAATCAGCAACTGACTGTCAAGATAAGGTTCAGAAGgtgtgactaa ... aaatctacagAGTTCCAAGTCTTTTAACTGGCCAGATGTTGCTGTTTCAGCCATGGTTGCT
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| GGACAAAGGATTAGGGAATGCCAATTCTGATGAAATCAACAATGAAAGCAAGCATAGAAGTTCAGAATCAGCAACTGACTGTCAAGATAAGGTTCAGAAGgtgtgactaatctgtattattaggccattagcaactaatcattttctcttttttgttctctatatttccctttttcttaaggggtatatgaatttgtctcacactccctcattctgtccccccctcccctgcccccaaaatctacag
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