1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' |
TATGAAAAGGCAGGCAATTTTCTCTTGCCTCACCTGCACTCCAGATGGGAATGCTGGAGTTTGCACAGCTTGTTCATTGTCTTGCCATGATGGTCATCAGgtagttcttttcctctgaatatagaattttggatttcactaccatagaactgataatggatatggatttttttattaatgtttcctatttgacattgaat...
species | Glycine max |
transcript | GLYMA11G01960.1 |
intron # | 3 |
splice site | 5' |
intron type | U2 |
EST: ATGCTGGAGTTTGCACAGCTTGTTCATTGTCTTGCCATGATGGTCATCAG ATTGTAGAGCTATGGAACAAAAAGAAACTTCAGATGTGATTGTGGGAACTCEST: gi|16106233|gb|BI893973.1|BI893973
genomic: ATGCTGGAGTTTGCACAGCTTGTTCATTGTCTTGCCATGATGGTCATCAGgtagttcttt ... tgttttgaagATTGTAGAGCTATGGA-CAAAAAGAAACTTCAGATGTGATTGTGGGAACTC
EST: ATGCTGGAGTTTGCACAGCTTGTTCATTGTCTTGCCATGATGGTCATCAG ATTGTAGAGCTATGGACAAAAAGAAACTTCAGATGTGATTGTGGGAACTCAEST: gi|192295390|gb|FG987004.1|FG987004
genomic: ATGCTGGAGTTTGCACAGCTTGTTCATTGTCTTGCCATGATGGTCATCAGgtagttcttt ... tgttttgaagATTGTAGAGCTATGGACAAAAAGAAACTTCAGATGTGATTGTGGGAACTCA
EST: ATGCTGGAGTTTGCACAGCTTGTTCATTGTCTTGCCATGATGGTCATCAG ATTGTAGAGCTATGGACAAAAAGAAACTTCAGATGTGATTGTGGGAACTCAEST: gi|20812619|gb|BQ297097.1|BQ297097
genomic: ATGCTGGAGTTTGCACAGCTTGTTCATTGTCTTGCCATGATGGTCATCAGgtagttcttt ... tgttttgaagATTGTAGAGCTATGGACAAAAAGAAACTTCAGATGTGATTGTGGGAACTCA
EST: ATGCTGGAGTTTGCACAGCTTGTTCATTGTCTTGCCATGATGGTCATCAG ATTGTAGAGCTATGGACAAAAAGAAACTTCAGATGTGATTGTGGGAACTCAEST: gi|192305248|gb|FG997528.1|FG997528
genomic: ATGCTGGAGTTTGCACAGCTTGTTCATTGTCTTGCCATGATGGTCATCAGgtagttcttt ... tgttttgaagATTGTAGAGCTATGGACAAAAAGAAACTTCAGATGTGATTGTGGGAACTCA
EST: ATGCTGGAGTTTGCACAGCTTGTTCATTGTCTTGCCATGATGGTCATCAG ATTGTAGAGCTATGGACAAAAAGAAACTTCAGATGTGATTGTGGGAACTCA
genomic: ATGCTGGAGTTTGCACAGCTTGTTCATTGTCTTGCCATGATGGTCATCAGgtagttcttt ... tgttttgaagATTGTAGAGCTATGGACAAAAAGAAACTTCAGATGTGATTGTGGGAACTCA
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| TATGAAAAGGCAGGCAATTTTCTCTTGCCTCACCTGCACTCCAGATGGGAATGCTGGAGTTTGCACAGCTTGTTCATTGTCTTGCCATGATGGTCATCAGgtagttcttttcctctgaatatagaattttggatttcactaccatagaactgataatggatatggatttttttattaatgtttcctatttgacattgaat
- - - - - - - - - - - - - - - - - - - - - - - - - ATGCTG
- - - - - - - - - - - - - - - - - - - - - - - - - - GCTGGA