1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' |
GAATGGGCGGCTGAATAAGTGTGGGGTTATTAGCCCTCGCTTTGATGTTGGTGTCAAAGAGATTGAAGGTTGGACTGCAAGACTACTACCCTCAAGACAGgtaaccttaaaacctaaccctgatcagtcacacctttgcctttgtcttccatatagttacctctttaattctttgcaatacactacaaagcatgagtatt...
species | Glycine max |
transcript | GLYMA11G00600.2 |
intron # | 3 |
splice site | 5' |
intron type | U2 |
EST: GTGTCAAAGAGATTGAAGGTTGGACTGCAAGACTACTACCCTCAAGACAG TTTGGGTATATTGTCTTGACAACCTCTGCTGGTATCATGGATCATGAAGAGEST: gi|9439843|gb|BE440356.1|BE440356
genomic: GTGTCAAAGAGATTGAAGGTTGGACTGCAAGACTACTACCCTCAAGACAGgtaaccttaa ... aatgatgcagTTTGGGTATATTGTCTTGACAACCTCTGCTGGTATCATGGATCATGAAGAG
EST: GTGTCAAAGAGATTGAAGGTTGGACTGCAAGACTACTACCCTCAAGACAG TTTGGGTATATTGTCTTGACAACCTCTGCTGGTATCATGGATCATGAAGAGEST: gi|16278564|gb|BI942970.1|BI942970
genomic: GTGTCAAAGAGATTGAAGGTTGGACTGCAAGACTACTACCCTCAAGACAGgtaaccttaa ... aatgatgcagTTTGGGTATATTGTCTTGACAACCTCTGCTGGTATCATGGATCATGAAGAG
EST: GTGTCAAAGAGATTGAAGGTTGGACTGCAAGACTACTACCCTCAATACAG TCTGGGTATATTGTCTTGACAACCTCTGCTGGTATCATGGATCATGAACAGEST: gi|7286186|gb|AW598673.1|AW598673
genomic: GTGTCAAAGAGATTGAAGGTTGGACTGCAAGACTACTACCCTCAAGACAGgtaaccttaa ... aatgatgcagTTTGGGTATATTGTCTTGACAACCTCTGCTGGTATCATGGATCATGAAGAG
EST: GTGTCAAAGAGATTGAAGGTTGGACTGCAAGACTACTACCCTCAAGACAG TTTGGGTATATTGTCTTGACAACCTCTGCTGGTATCATGGATCATGAAGAGEST: gi|298192624|gb|HO033058.1|HO033058
genomic: GTGTCAAAGAGATTGAAGGTTGGACTGCAAGACTACTACCCTCAAGACAGgtaaccttaa ... aatgatgcagTTTGGGTATATTGTCTTGACAACCTCTGCTGGTATCATGGATCATGAAGAG
EST: GTGTCAAAGAGATTGAAGGTTGGACTGCAATACTACTACCCTCAAGACAG TTTGGGTATATTGTCTTGACAACCTCTGCTGGTATCATGGATCATGAAGAG
genomic: GTGTCAAAGAGATTGAAGGTTGGACTGCAAGACTACTACCCTCAAGACAGgtaaccttaa ... aatgatgcagTTTGGGTATATTGTCTTGACAACCTCTGCTGGTATCATGGATCATGAAGAG
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| GAATGGGCGGCTGAATAAGTGTGGGGTTATTAGCCCTCGCTTTGATGTTGGTGTCAAAGAGATTGAAGGTTGGACTGCAAGACTACTACCCTCAAGACAGgtaaccttaaaacctaaccctgatcagtcacacctttgcctttgtcttccatatagttacctctttaattctttgcaatacactacaaagcatgagtatt
- - - - - - - - - - - - - - - - - - - - - - - - - - - - AAGAGA
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - TTGAAG
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - GCAAGA