1 5' 3' | 2 5' 3' | 3 5' 3' |
GAGAAGGATGCTGGTGGCTTTCACCTGTACCATCTGTGGCCAGCGAACCACACGGGCTATTAATCCCCATGCTTACACTGATGGCACTGTTTTTGTGCAGgtaactttttgttttttgttaatcttaacccctgccttatcacatttctcaattatttttttggattgaatttggaaccaaatcctaaactaatagtcca...
species | Glycine max |
transcript | GLYMA10G43010.1 |
intron # | 3 |
splice site | 5' |
intron type | U2 |
EST: ACGGGCTAAGAGA-CCCCATGCTTACACTGATGGCACTGTTTTTGTGCAG TGCTGTGGATGCAATGCATATCATAAGCTCGTGGATCACTTGAACCTGTTTEST: gi|51342655|gb|CO983620.1|CO983620
genomic: ACGGGCTATTA-ATCCCCATGCTTACACTGATGGCACTGTTTTTGTGCAGgtaacttttt ... ttgttgtcagTGCTGTGGATGCAATGCATATCATAAGCTCGTGGATCACTTGAACCTGTTT
EST: CACGGGCTATTAATCCCCATGCTTACACTGATGGCACTGTTTTTGTGCAG TGCTGTGGATGCAATGCATATCATAAGCTCGTGGATCACTTGAACCTGTTTEST: gi|192304793|gb|FG995015.1|FG995015
genomic: CACGGGCTATTAATCCCCATGCTTACACTGATGGCACTGTTTTTGTGCAGgtaacttttt ... ttgttgtcagTGCTGTGGATGCAATGCATATCATAAGCTCGTGGATCACTTGAACCTGTTT
EST: CACGGGCTATTAATCCCCATGCTTACACTGATGGCACTGTTTTTGTGCAG TGCTGTGGATGCAATGCATATCATAAGCTCGTGGATCACTTGAACCTGTTT
genomic: CACGGGCTATTAATCCCCATGCTTACACTGATGGCACTGTTTTTGTGCAGgtaacttttt ... ttgttgtcagTGCTGTGGATGCAATGCATATCATAAGCTCGTGGATCACTTGAACCTGTTT
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| GAGAAGGATGCTGGTGGCTTTCACCTGTACCATCTGTGGCCAGCGAACCACACGGGCTATTAATCCCCATGCTTACACTGATGGCACTGTTTTTGTGCAGgtaactttttgttttttgttaatcttaacccctgccttatcacatttctcaattatttttttggattgaatttggaaccaaatcctaaactaatagtcca
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -ccctgcc