1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' | 7 5' 3' | 8 5' 3' | 9 5' 3' | 10 5' 3' | 11 5' 3' | 12 5' 3' | 13 5' 3' | 14 5' 3' |
AATACAGAACTGTATCTGGAGTTGCTGGACCATTGGTCATTCTTGACAAAGTTAAGgtaatgatggtgtgctagttgatatttttaatgaattttctggtattttggttttctcaatattctgctgtgactaaagtttatattttatactgaaactgcatcag
species | Glycine max |
transcript | GLYMA10G42940.2 |
intron # | 3 |
splice site | 5' |
intron type | U2 |
EST: GAACTGTATCTGGAGTTGCTGGACCATTGGTCATTCTTGACAAAGTTAAG GGACCCAAATTTCAAGAGATTGTTAATATTCGTTTAGGAGATGGAACTACTEST: gi|120533425|gb|EH261558.1|EH261558
genomic: GAACTGTATCTGGAGTTGCTGGACCATTGGTCATTCTTGACAAAGTTAAGgtaatgatgg ... actgcatcagGGACCCAAATTTCAAGAGATTGTTAATATTCGTTTAGGAGATGGAACTACT
EST: GAACTGTATCTGGAGTTGCTGGACCATTGGTCATTCTTGACAAAGTTAAG GGACCCAAATTTCAAGAGATTGTTAATATTCGTTTAGGAGATGGAACTACTEST: gi|19053577|gb|BM732244.1|BM732244
genomic: GAACTGTATCTGGAGTTGCTGGACCATTGGTCATTCTTGACAAAGTTAAGgtaatgatgg ... actgcatcagGGACCCAAATTTCAAGAGATTGTTAATATTCGTTTAGGAGATGGAACTACT
EST: GAACTGTATCTGGAGTTGCTGGACCATTGGTCATTCTTGACAAAGTTAAG GGACCCAAATTTCAAGAGATTGTTAATATTCGTTTAGGAGATGGAACTACTEST: gi|213596831|gb|DB964094.1|DB964094
genomic: GAACTGTATCTGGAGTTGCTGGACCATTGGTCATTCTTGACAAAGTTAAGgtaatgatgg ... actgcatcagGGACCCAAATTTCAAGAGATTGTTAATATTCGTTTAGGAGATGGAACTACT
EST: GAACTGTATCTGGAGTTGCTGGACCATTGGTCATTCTTGACAAAGTTAAG GGACCCAAATTTCAAGAGATTGTTAATATTCGTTTAGGAGATGGAACTACTEST: gi|13478635|gb|BG508033.1|BG508033
genomic: GAACTGTATCTGGAGTTGCTGGACCATTGGTCATTCTTGACAAAGTTAAGgtaatgatgg ... actgcatcagGGACCCAAATTTCAAGAGATTGTTAATATTCGTTTAGGAGATGGAACTACT
EST: GAACTGTATCTGGAGTTGCTGGACCATTGGTCATTCTTGACAAAGTTAAG GGACCCAAATTTCAAGAGATTGTTAATATTCGTTTAGGAGATGGAACTACTEST: gi|213615425|gb|DB965511.1|DB965511
genomic: GAACTGTATCTGGAGTTGCTGGACCATTGGTCATTCTTGACAAAGTTAAGgtaatgatgg ... actgcatcagGGACCCAAATTTCAAGAGATTGTTAATATTCGTTTAGGAGATGGAACTACT
EST: GAACTGTATCTGGAGTTGCTGGACCATTGGTCATTCTTGACAAAGTTAAG GGACCCAAATTTCAAGAGATTGTTAATATTCGTTTAGGAGATGGAACTACT
genomic: GAACTGTATCTGGAGTTGCTGGACCATTGGTCATTCTTGACAAAGTTAAGgtaatgatgg ... actgcatcagGGACCCAAATTTCAAGAGATTGTTAATATTCGTTTAGGAGATGGAACTACT
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| AATACAGAACTGTATCTGGAGTTGCTGGACCATTGGTCATTCTTGACAAAGTTAAGgtaatgatggtgtgctagttgatatttttaatgaattttctggtattttggttttctcaatattctgctgtgactaaagtttatattttatactgaaactgcatcag
- - - - - - - - - - - GCTGGA