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Data associated with selected splice site

Sequence

 atgc   intronic sequence     ATGC   exonic sequence

AACTTGGAGTCCTTAGCTGGAAATTAGATGCTGATAACCATGAAAATGATCCAGAGCTGAAAAAGATTCGTGAAGAGCGTGGCTACACCTACATGgtttgtaatactaatgtttcattataatggtttagaattaactttccttttgctcaatattaatgaatatatgtagactataattttaattattatgtctaacattgtgcactatttatgcatcttggcattctggctatgtttatgttttttaataatttaacctgagtcacctttttcttcag

Basic information

species Glycine max
transcript GLYMA10G38940.3
intron # 3
splice site 5'
intron type U2

Mapped EST sequences

Showing partial alignments of ESTs and genomic sequences. See full alignments


 ATGC     EST sequence
 ATGC     genomic sequence (exon)
 ATGC     genomic sequence (truncated intron)


EST: gi|22525505|gb|BU084316.1|BU084316
EST:     ATGATCCAGAGCTGAAAAAGATTCGTGAAGAGCGTGGCTACACCTACATG                         GATGTTTGTGAGGTCTGCCCAGAAAAGTTGCCAAATTATGAGCAGAAAATC
genomic: ATGATCCAGAGCTGAAAAAGATTCGTGAAGAGCGTGGCTACACCTACATGgtttgtaata ... ttttcttcagGATGTTTGTGAGGTCTGCCCAGAAAAGTTGCCAAATTATGAGCAGAAAATC
EST: gi|13252055|gb|BG362958.1|BG362958
EST:     ATGATCCAGAGCTGAAAAAGATTCGTGAAGAGCGTGGCTACACCTACATG                         GATGTTTGTGAGGTCTGCCCAGAAAAGTTGCCAAATTATGAGCAGAAAATC
genomic: ATGATCCAGAGCTGAAAAAGATTCGTGAAGAGCGTGGCTACACCTACATGgtttgtaata ... ttttcttcagGATGTTTGTGAGGTCTGCCCAGAAAAGTTGCCAAATTATGAGCAGAAAATC
EST: gi|254329556|gb|GR839109.1|GR839109
EST:     ATGATCCAGAGCTGAAAAAGATTCGTGAAGAGCGTGGCTACACCTACATG                         GATGTTTGTGAGGTCTGCCCAGAAAAGTTGCCAAATTATGAGCAGAAAATC
genomic: ATGATCCAGAGCTGAAAAAGATTCGTGAAGAGCGTGGCTACACCTACATGgtttgtaata ... ttttcttcagGATGTTTGTGAGGTCTGCCCAGAAAAGTTGCCAAATTATGAGCAGAAAATC
EST: gi|120493118|gb|EH221285.1|EH221285
EST:     ATGATCCAGAGCTGAAAAAGATTCGTGAAGAGCGTGGCTACACCTACATG                         GATGTTTGTGAGGTCTGCCCAGAAAAGTTGCCAAATTATGAGCAGAAAATC
genomic: ATGATCCAGAGCTGAAAAAGATTCGTGAAGAGCGTGGCTACACCTACATGgtttgtaata ... ttttcttcagGATGTTTGTGAGGTCTGCCCAGAAAAGTTGCCAAATTATGAGCAGAAAATC
EST: gi|19270789|gb|BM887045.1|BM887045
EST:     ATGATCCAGAGCTGAAAAAGATTCGTGAAGAGCGTGGCTACACCTACATG                         GATGTTTGTGAGGTCTGCCCAGAAAAGTTGCCAAATTATGAGCAGAAAATC
genomic: ATGATCCAGAGCTGAAAAAGATTCGTGAAGAGCGTGGCTACACCTACATGgtttgtaata ... ttttcttcagGATGTTTGTGAGGTCTGCCCAGAAAAGTTGCCAAATTATGAGCAGAAAATC
EST: gi|6724539|gb|AW308938.1|AW308938
EST:     ATGATCCAGAGCTGAAAAAGATTCGTGAAGAGCGTGGCTACACCTACATG                         GATGTTTGTGAGGTCTGCCCAGAAAAGTTGCCAAATTATGAGCAGAAAATC
genomic: ATGATCCAGAGCTGAAAAAGATTCGTGAAGAGCGTGGCTACACCTACATGgtttgtaata ... ttttcttcagGATGTTTGTGAGGTCTGCCCAGAAAAGTTGCCAAATTATGAGCAGAAAATC
EST: gi|9819664|gb|BE555177.1|BE555177
EST:     ATGATCCAGAGCTGAAAAAGATTCGTGAAGAGCGTGGCTACACCTACATG                         GATGTTTGTGAGGTCTGCCCAGAAAAGTTGCCAAATTATGAGCAGAAAATC
genomic: ATGATCCAGAGCTGAAAAAGATTCGTGAAGAGCGTGGCTACACCTACATGgtttgtaata ... ttttcttcagGATGTTTGTGAGGTCTGCCCAGAAAAGTTGCCAAATTATGAGCAGAAAATC
EST: gi|193605793|gb|FK555595.1|FK555595
EST:     ATGATCCAGAGCTGAAAAAGATTCGTGAAGAGCGTGGCTACACCTACATG                         GATGTTTGTGAGGTCTGCCCAGAAAAGTTGCCAAATTATGAGCAGAAAATC
genomic: ATGATCCAGAGCTGAAAAAGATTCGTGAAGAGCGTGGCTACACCTACATGgtttgtaata ... ttttcttcagGATGTTTGTGAGGTCTGCCCAGAAAAGTTGCCAAATTATGAGCAGAAAATC
EST: gi|13482036|gb|BG511379.1|BG511379
EST:     ATGATCCAGAGCTGAAAAAGATTCGTGAAGAGCGTGGCTACACCTACATG                         GATGTTTGTGAGGTCTGCCCAGAAAAGTTGCCAAATTATGAGCAGAAAATC
genomic: ATGATCCAGAGCTGAAAAAGATTCGTGAAGAGCGTGGCTACACCTACATGgtttgtaata ... ttttcttcagGATGTTTGTGAGGTCTGCCCAGAAAAGTTGCCAAATTATGAGCAGAAAATC
EST: gi|15813895|gb|BI786170.1|BI786170
EST:     ATGATCCAGAGCTGAAAAAGATTCGTGAAGAGCGTGGCTACACCTACATG                         GATGTTTGTGAGGTCTGCCCAGAAAAGTTGCCAAATTATGAGCAGAAAATC
genomic: ATGATCCAGAGCTGAAAAAGATTCGTGAAGAGCGTGGCTACACCTACATGgtttgtaata ... ttttcttcagGATGTTTGTGAGGTCTGCCCAGAAAAGTTGCCAAATTATGAGCAGAAAATC
EST: gi|22522682|gb|BU081493.1|BU081493
EST:     ATGATCCAGAGCTGAAAAAGATTCGTGAAGAGCGTGGCTACACCTACATG                         GATGTTTGTGAGGTCTGCCCAGAAAAGTTGCCAAATTATGAGCAGAAAATC
genomic: ATGATCCAGAGCTGAAAAAGATTCGTGAAGAGCGTGGCTACACCTACATGgtttgtaata ... ttttcttcagGATGTTTGTGAGGTCTGCCCAGAAAAGTTGCCAAATTATGAGCAGAAAATC
EST: gi|14258511|gb|BG881419.1|BG881419
EST:     ATGATCCAGAGCTGAAAAAGATTCGTGAAGAGCGTGGCTACACCTACATG                         GATGTTTGTGAGGTCTGCCCAGAAAAGTTGCCAAATTATGAGCAGAAAATC
genomic: ATGATCCAGAGCTGAAAAAGATTCGTGAAGAGCGTGGCTACACCTACATGgtttgtaata ... ttttcttcagGATGTTTGTGAGGTCTGCCCAGAAAAGTTGCCAAATTATGAGCAGAAAATC
EST: gi|8826939|gb|BE210669.1|BE210669
EST:     ATGATCCAGAGCTGAAAAAGATTCGTGAAGAGCGTGGCTACACCTACATG                         GATGTTTGTGAGGTCTGCCCTGAAAAGTTGCCAAATTATGAGCAGAAAATC
genomic: ATGATCCAGAGCTGAAAAAGATTCGTGAAGAGCGTGGCTACACCTACATGgtttgtaata ... ttttcttcagGATGTTTGTGAGGTCTGCCCAGAAAAGTTGCCAAATTATGAGCAGAAAATC
EST: gi|254315800|gb|GR825609.1|GR825609
EST:     ATGATCCAGAGCTGAAAAAGATTCGTGAAGAGCGTGGCTACACCTACATG                         GATGTTTGTGAGGTCTGCCCAGAAAAGTTGCCAAATTATGAGCAGAAAATC
genomic: ATGATCCAGAGCTGAAAAAGATTCGTGAAGAGCGTGGCTACACCTACATGgtttgtaata ... ttttcttcagGATGTTTGTGAGGTCTGCCCAGAAAAGTTGCCAAATTATGAGCAGAAAATC
EST: gi|208122931|gb|GD923665.1|GD923665
EST:     GATCCAGAGCTGAAAAAGAATTCGTGAAGAGCGTGGCTACACCTACATG                         GATGTTTGTGAGGTCTGCCCAGAAAAGTTGCCAAATTATGAGCAGAAAATC
genomic: GATCCAGAGCTGAAAAAG-ATTCGTGAAGAGCGTGGCTACACCTACATGgtttgtaata ... ttttcttcagGATGTTTGTGAGGTCTGCCCAGAAAAGTTGCCAAATTATGAGCAGAAAATC
EST: gi|209708652|gb|BW678829.1|BW678829
EST:     ATGATCCAGAGCTGAAAAAGATTCGTGAAGAGCGTGGCTACACCTACATG                         GATGTTTGTGAGGTCTGCCCAGAAAAGTTGCCAAATTATGAGCAGAAAATC
genomic: ATGATCCAGAGCTGAAAAAGATTCGTGAAGAGCGTGGCTACACCTACATGgtttgtaata ... ttttcttcagGATGTTTGTGAGGTCTGCCCAGAAAAGTTGCCAAATTATGAGCAGAAAATC
EST: gi|213604889|gb|DB960570.1|DB960570
EST:     ATGATCCAGAGCTGAAAAAGATTCGTGAAGAGCGTGGCTACACCTACATG                         GATGTTTGTGAGGTCTGCCCAGAAAAGTTGCCAAATTATGAGCAGAAAATC
genomic: ATGATCCAGAGCTGAAAAAGATTCGTGAAGAGCGTGGCTACACCTACATGgtttgtaata ... ttttcttcagGATGTTTGTGAGGTCTGCCCAGAAAAGTTGCCAAATTATGAGCAGAAAATC
EST: gi|13481853|gb|BG511196.1|BG511196
EST:     ATGATCCAGAGCTGAAAAAGATTCGTGAAGAGCGTGGCTACACCTACATG                         GATGTTTGTGAGGTCTGCCCAGAAAAGTTGCCAAATTATGAGCAGAAAATC
genomic: ATGATCCAGAGCTGAAAAAGATTCGTGAAGAGCGTGGCTACACCTACATGgtttgtaata ... ttttcttcagGATGTTTGTGAGGTCTGCCCAGAAAAGTTGCCAAATTATGAGCAGAAAATC
EST: gi|6501990|gb|AW203363.1|AW203363
EST:     ATGATCCAGAGCTGAAAAAGATTCGTGAAGAGCGTGGCTACACCTACATG                         GATGTTTGTGAGGTCTGCCCAGAAAAGTTGCCAAATTATGAGCAGAAAATC
genomic: ATGATCCAGAGCTGAAAAAGATTCGTGAAGAGCGTGGCTACACCTACATGgtttgtaata ... ttttcttcagGATGTTTGTGAGGTCTGCCCAGAAAAGTTGCCAAATTATGAGCAGAAAATC
EST: gi|192296027|gb|FG989421.1|FG989421
EST:     ATGACCCAGAGCTGAAAAAGATTCGTGAAGAGCGTGGCTACACCTACATG                         GATGTTTGTGAGGTCTGCCCAGAAAAGTTGCCAAATTATGAGCAGAAAATC
genomic: ATGATCCAGAGCTGAAAAAGATTCGTGAAGAGCGTGGCTACACCTACATGgtttgtaata ... ttttcttcagGATGTTTGTGAGGTCTGCCCAGAAAAGTTGCCAAATTATGAGCAGAAAATC
EST: gi|298186912|gb|HO034011.1|HO034011
EST:     ATGATCCAGAGCTGAAAAAGATTCGTGAAGAGCGTGGCTACACCTACATG                         GATGTTTGTGAGGTCTGCCCAGAAAAGTTGCCAAATTATGAGCAGAAAATC
genomic: ATGATCCAGAGCTGAAAAAGATTCGTGAAGAGCGTGGCTACACCTACATGgtttgtaata ... ttttcttcagGATGTTTGTGAGGTCTGCCCAGAAAAGTTGCCAAATTATGAGCAGAAAATC
EST: gi|192318385|gb|FK006505.1|FK006505
EST:     ATGATCCAGAGCTGAAAAAGATTCGTGAAGAGCGTGGCTACACCTACATG                         GATGTTTGTGAGGTCTGCCCAGAAAAGTTGCCAAATTATGAGCAGAAAATC
genomic: ATGATCCAGAGCTGAAAAAGATTCGTGAAGAGCGTGGCTACACCTACATGgtttgtaata ... ttttcttcagGATGTTTGTGAGGTCTGCCCAGAAAAGTTGCCAAATTATGAGCAGAAAATC
EST: gi|7591166|gb|AW706904.1|AW706904
EST:     ATGATCCAGAGCTGAAAAAGATTCGTGAAGAGCGTGGCTACACCTACATG                         GATGTTTGTGAGGTCTGCCCAGAAAAGTTGCCAAATTATGAGCAGAAAATC
genomic: ATGATCCAGAGCTGAAAAAGATTCGTGAAGAGCGTGGCTACACCTACATGgtttgtaata ... ttttcttcagGATGTTTGTGAGGTCTGCCCAGAAAAGTTGCCAAATTATGAGCAGAAAATC
EST: gi|298174446|gb|HO014591.1|HO014591
EST:     ATGATCCAGAGCTGAAAAAGATTCGTGAAGAGCGTGGCTACACCTACATG                         GATGTTTGTGAGGTCTGCCCAGAAAAGTTGCCAAATTATGAGCAGAAAATC
genomic: ATGATCCAGAGCTGAAAAAGATTCGTGAAGAGCGTGGCTACACCTACATGgtttgtaata ... ttttcttcagGATGTTTGTGAGGTCTGCCCAGAAAAGTTGCCAAATTATGAGCAGAAAATC
EST: gi|7042440|gb|AW472334.1|AW472334
EST:     ATGATCCAGAGCTGAAAAAGATTCGTGAAGAGCGTGGCTACACCTACATG                         GATGTTTGTGAGGTCTGCCCAGAAAAGTTGCCAAATTATGAGCAGAAAATC
genomic: ATGATCCAGAGCTGAAAAAGATTCGTGAAGAGCGTGGCTACACCTACATGgtttgtaata ... ttttcttcagGATGTTTGTGAGGTCTGCCCAGAAAAGTTGCCAAATTATGAGCAGAAAATC
EST: gi|7041921|gb|AW471815.1|AW471815
EST:     ATGATCCAGAGCTGAAAAAGATTCGTGAAGAGCGTGGCTACACCTACATG                         GATGTTTGTGAGGTCTGCCCAGAAAAGTTGCCAAATTATGAGCAGAAAATC
genomic: ATGATCCAGAGCTGAAAAAGATTCGTGAAGAGCGTGGCTACACCTACATGgtttgtaata ... ttttcttcagGATGTTTGTGAGGTCTGCCCAGAAAAGTTGCCAAATTATGAGCAGAAAATC
EST: gi|298167016|gb|HO010455.1|HO010455
EST:     ATGATCCAGAGCTGAAAAAGATTCGTGAAGAGCGTGGCTACACCTACATG                         GATGTTTGTGAGGTCTGCCCAGAAAAGTTGCCAAATTATGAGCAGAAAATC
genomic: ATGATCCAGAGCTGAAAAAGATTCGTGAAGAGCGTGGCTACACCTACATGgtttgtaata ... ttttcttcagGATGTTTGTGAGGTCTGCCCAGAAAAGTTGCCAAATTATGAGCAGAAAATC
EST: gi|9902326|gb|BE611294.1|BE611294
EST:     ATGATCCAGAGCTGAAAAAGATTCGTGAAGAGCGTGGCTACACCTACATG                         GATGTTTGTGAGGTCTGCCCAGAAAAGTTGCCAAATTATGAGCAGAAAATC
genomic: ATGATCCAGAGCTGAAAAAGATTCGTGAAGAGCGTGGCTACACCTACATGgtttgtaata ... ttttcttcagGATGTTTGTGAGGTCTGCCCAGAAAAGTTGCCAAATTATGAGCAGAAAATC
EST: gi|10844547|gb|BF067878.1|BF067878
EST:     ATGATCCAGAGCTGAAAAAGATTCGTGAAGAGCGTGGCTACACCTACATG                         GATGTTTGTGAGGTCTGCCCAGAAAAGTTGCCAAATTATGAGCAGAAAATC
genomic: ATGATCCAGAGCTGAAAAAGATTCGTGAAGAGCGTGGCTACACCTACATGgtttgtaata ... ttttcttcagGATGTTTGTGAGGTCTGCCCAGAAAAGTTGCCAAATTATGAGCAGAAAATC
EST: gi|207796803|gb|GD768865.1|GD768865
EST:     ATGATCCAGAGCTGAAAAAGATTCGTGAAGAGCGTGGCTACACCTACATG                         GATGTTTGTGAGGTCTGCCCAGAAAAGTTGCCA
genomic: ATGATCCAGAGCTGAAAAAGATTCGTGAAGAGCGTGGCTACACCTACATGgtttgtaata ... ttttcttcagGATGTTTGTGAGGTCTGCCCAGAAAAGTTGCCA
EST: gi|27426192|gb|CA937712.1|CA937712
EST:     ATGATCCAGAGCTGAAAAAGATTCGTGAAGAGCGTGGCTACACCTACATG                         GATGTTTGTGAGGTCTGCCCAGAAAAGTTGCCAAATTATGAGCAGAAAATC
genomic: ATGATCCAGAGCTGAAAAAGATTCGTGAAGAGCGTGGCTACACCTACATGgtttgtaata ... ttttcttcagGATGTTTGTGAGGTCTGCCCAGAAAAGTTGCCAAATTATGAGCAGAAAATC
EST: gi|298170925|gb|HO015901.1|HO015901
EST:     ATGATCCAGAGCTGAAAAAGATTCGTGAAGAGCGTGGCTACACCTACATG                         GATGTTTGTGAGGTCTGCCCAGAAAAGTTGCCAAATTATGAGCAGAAAATC
genomic: ATGATCCAGAGCTGAAAAAGATTCGTGAAGAGCGTGGCTACACCTACATGgtttgtaata ... ttttcttcagGATGTTTGTGAGGTCTGCCCAGAAAAGTTGCCAAATTATGAGCAGAAAATC
EST: gi|254339056|gb|GR847773.1|GR847773
EST:     ATGATCCAGAGCTGAAAAAGATTCGTGAAGAGCGTGGCTACACCTACATG                         GATGTTTGTGAGGTCTGCCCAGAAAAGTTGCCAAATTATGAGCAGAAAATC
genomic: ATGATCCAGAGCTGAAAAAGATTCGTGAAGAGCGTGGCTACACCTACATGgtttgtaata ... ttttcttcagGATGTTTGTGAGGTCTGCCCAGAAAAGTTGCCAAATTATGAGCAGAAAATC
EST: gi|207839806|gb|GD810895.1|GD810895
EST:     ATGATCCAGAGCTGAAAAAGATTCGTGAAGAGCGTGGCTACACCTACATG                         GATGTTTGTGAGGTCTGCCCAGAAAAGTTGCCAAATTATGAGCAGAAAATC
genomic: ATGATCCAGAGCTGAAAAAGATTCGTGAAGAGCGTGGCTACACCTACATGgtttgtaata ... ttttcttcagGATGTTTGTGAGGTCTGCCCAGAAAAGTTGCCAAATTATGAGCAGAAAATC
EST: gi|298194017|gb|HO040665.1|HO040665
EST:     ATGATCCAGAGCTGAAAAAGATTCGTGAAGAGCGTGGCTACACCTACATG                         GATGTTTGTGAGGTCTGCCCAGAAAAGTTGCCAAATTATGAGCAGAAAATC
genomic: ATGATCCAGAGCTGAAAAAGATTCGTGAAGAGCGTGGCTACACCTACATGgtttgtaata ... ttttcttcagGATGTTTGTGAGGTCTGCCCAGAAAAGTTGCCAAATTATGAGCAGAAAATC
EST: gi|298198070|gb|HO039609.1|HO039609
EST:     ATGATCCAGAGCTGAAAAAGATTCGTGAAGAGCGTGGCTACACCTACATG                         GATGTTTGTGAGGTCTGCCCAGAAAAGTTACCAAATTATGAGCAGAAAATC
genomic: ATGATCCAGAGCTGAAAAAGATTCGTGAAGAGCGTGGCTACACCTACATGgtttgtaata ... ttttcttcagGATGTTTGTGAGGTCTGCCCAGAAAAGTTGCCAAATTATGAGCAGAAAATC
EST: gi|298184067|gb|HO029280.1|HO029280
EST:     ATGATCCAGAGCTGAAAAAGATTCGTGAAGAGCGTGGCTACACCTACATG                         GATGTTTGTGAGGTCTGCCCAGAAAAGTTGCCAAATTATGAGCAGAAAATC
genomic: ATGATCCAGAGCTGAAAAAGATTCGTGAAGAGCGTGGCTACACCTACATGgtttgtaata ... ttttcttcagGATGTTTGTGAGGTCTGCCCAGAAAAGTTGCCAAATTATGAGCAGAAAATC
EST: gi|13312690|gb|BG406341.1|BG406341
EST:     TGATCCAGAGCTGANAAAAGATTCGTGAAGAGCGTGGCTACACCTACATG                         GATGTTTGTGAGGTCTGCCCAGAAAAGTTGCCAAATTATGAGCAGAAAATC
genomic: TGATCCAGAGCTGA-AAAAGATTCGTGAAGAGCGTGGCTACACCTACATGgtttgtaata ... ttttcttcagGATGTTTGTGAGGTCTGCCCAGAAAAGTTGCCAAATTATGAGCAGAAAATC
EST: gi|7283509|gb|AW596116.1|AW596116
EST:     ATGATCCAGAGCTGAAAAAGATTCGTGAAGAGCGTGGCTACACCTACATG                         GATGTTTGTGAGGTCTGCCCAGAAAAGTTGCCAAATTATGAGCAGAAAATC
genomic: ATGATCCAGAGCTGAAAAAGATTCGTGAAGAGCGTGGCTACACCTACATGgtttgtaata ... ttttcttcagGATGTTTGTGAGGTCTGCCCAGAAAAGTTGCCAAATTATGAGCAGAAAATC
EST: gi|15285900|gb|BI469791.1|BI469791
EST:     GCTACACCTACATG                         GATGTTTGTGAGGTCTGCCCAGAAAAGTTGCCAAATTATGAGCAGAAAATC
genomic: GCTACACCTACATGgtttgtaata ... ttttcttcagGATGTTTGTGAGGTCTGCCCAGAAAAGTTGCCAAATTATGAGCAGAAAATC
EST: gi|6455203|gb|AW185886.1|AW185886
EST:     ATGATCCAGAGCTGAAAAAGATTCGTGAAGAGCGTGGCTACACCTACATG                         GATGTTTGTGAGGTCTGCCCAGAAAAGTTGCCAAATTATGAGCAGAAAATC
genomic: ATGATCCAGAGCTGAAAAAGATTCGTGAAGAGCGTGGCTACACCTACATGgtttgtaata ... ttttcttcagGATGTTTGTGAGGTCTGCCCAGAAAAGTTGCCAAATTATGAGCAGAAAATC
EST: gi|4396770|gb|AI495767.1|AI495767
EST:     TGATCCAGAGCTGAAAAAGAATCGTGAAGAGCGTGGCTACACCTACAATG                         GATGTTTGTGAGGTCTGCCCCAGAAA-GTTGCCAAATTATGAGCAGAAAA
genomic: TGATCCAGAGCTGAAAAAGATTCGTGAAGAGCGTGGCTACACCTACA-TGgtttgtaata ... ttttcttcagGATGTTTGTGAGGTCTGCCC-AGAAAAGTTGCCAAATTATGAGCAGAAAA
EST: gi|4437017|gb|AI522882.1|AI522882
EST:     ATGATCCAGAGCTGAAAAAGATTCGTGAAGAGCGTGGCTACACCTACATG                         GATGTTTGTGAGGTCTGCCCAGAAAAGTTGCCAAATTATGAGCAGAAAATC
genomic: ATGATCCAGAGCTGAAAAAGATTCGTGAAGAGCGTGGCTACACCTACATGgtttgtaata ... ttttcttcagGATGTTTGTGAGGTCTGCCCAGAAAAGTTGCCAAATTATGAGCAGAAAATC
EST: gi|208195023|gb|GD992128.1|GD992128
EST:     ATGATCCAGAGCTGAAAAAGATTCGTGAAGAGCGTGGCTACACCTACATG                         GATGTTTGTGAGGTCTGCCCAGAAAAGTTGCCAAATTATGAGCAGAAAATC
genomic: ATGATCCAGAGCTGAAAAAGATTCGTGAAGAGCGTGGCTACACCTACATGgtttgtaata ... ttttcttcagGATGTTTGTGAGGTCTGCCCAGAAAAGTTGCCAAATTATGAGCAGAAAATC
EST: gi|207831080|gb|GD801974.1|GD801974
EST:     ATGATCCAGGGCTGAAAAAGATTCGTGAAGAGCGTGGCTACACCTACATG                         GATGTTTGTGAGGTCT
genomic: ATGATCCAGAGCTGAAAAAGATTCGTGAAGAGCGTGGCTACACCTACATGgtttgtaata ... ttttcttcagGATGTTTGTGAGGTCT
EST: gi|120497212|gb|EH225379.1|EH225379
EST:     ATGATCCAGAGCTGAAAAAGATTCGTGAAGAGCGTGGCTACACCTACATG                         GATGTTTGTGAGGTCTGCCCAGAAAAGTTGCCAAATTATGAGCAGAAAATC
genomic: ATGATCCAGAGCTGAAAAAGATTCGTGAAGAGCGTGGCTACACCTACATGgtttgtaata ... ttttcttcagGATGTTTGTGAGGTCTGCCCAGAAAAGTTGCCAAATTATGAGCAGAAAATC
EST: gi|23726129|gb|BU761046.1|BU761046
EST:     ATGATCCAGAGCTGAAAAAGATTCGTGAAGAGCGTGGCTACACCTACATG                         GATGTTTGTGAGGTCTGCCCAGAAAAGTTGCCAAATTATGAGCAGAAAATC
genomic: ATGATCCAGAGCTGAAAAAGATTCGTGAAGAGCGTGGCTACACCTACATGgtttgtaata ... ttttcttcagGATGTTTGTGAGGTCTGCCCAGAAAAGTTGCCAAATTATGAGCAGAAAATC
EST: gi|11273900|gb|BF324289.1|BF324289
EST:     ATGATCCAGAGCTGAAAAAGATTCGTGAAGAGCGTGGCTACACCTACATG                         GATGTTTGTGAGGTCTGCCCAGAAAAGTTGCCAAATTATGAGCAGAAAATC
genomic: ATGATCCAGAGCTGAAAAAGATTCGTGAAGAGCGTGGCTACACCTACATGgtttgtaata ... ttttcttcagGATGTTTGTGAGGTCTGCCCAGAAAAGTTGCCAAATTATGAGCAGAAAATC
EST: gi|8282521|gb|BE020012.1|BE020012
EST:     ATGATCCAGAGCTGAAAAAGATTCGTGAAGAGCGTGGCTACACCTACATG                         GATGTTTGTGAGGTCTGCCCAGAAAAGTTGCCAAATTATGAGCAGAAAATC
genomic: ATGATCCAGAGCTGAAAAAGATTCGTGAAGAGCGTGGCTACACCTACATGgtttgtaata ... ttttcttcagGATGTTTGTGAGGTCTGCCCAGAAAAGTTGCCAAATTATGAGCAGAAAATC

Putative cis-regulatory sequences

 atgc intron ATGC exonic elements by Pertea et al.
 ATGC exon atgc putative intronic elements
 ATGC putative exonic elements identified for retained introns
        10        20        30        40        50        60        70        80        90        100       110       120       130       140       150       160       170       180       190       200       210       220 
---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| 
AACTTGGAGTCCTTAGCTGGAAATTAGATGCTGATAACCATGAAAATGATCCAGAGCTGAAAAAGATTCGTGAAGAGCGTGGCTACACCTACATGgtttgtaatactaatgtttcattataatggtttagaattaactttccttttgctcaatattaatgaatatatgtagactataattttaattattatgtctaacattgtgcactatttatgcatcttggcattctggctatgtttatgttttttaataatttaacctgagtcacctttttcttcag

- - - - - - - - - - - - - - - - - - - - - - - - - - AGAGCT
- - - - - - - - - - - - - - - - - - - - - - - - - - - AGCTGA
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - TGAAGA