1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' |
ATGCTGTGCTTGCAAGAGTTGCAACCGAGAAGAGGCTGTCACTAATCAAAGCATGGGAAGAAAGTGAAAAGTCCAAAGCAGATAACAAgtaagagcttgcaccacctccataactatctatgctggtttagcatttcatgtggactcagttctattcataactatggggatcaataaaaaaaaaggga...
species | Glycine max |
transcript | GLYMA10G38080.1 |
intron # | 3 |
splice site | 5' |
intron type | U2 |
EST: ACTAATACAAAGCAGTGGGAAGAAAGTGAAAAGTCCAAAGCAGATAACAA GTCTCACAAAAAGCTTTCAGCCATTTCAGCATGGGAAAACEST: gi|7795717|gb|AW781114.1|AW781114
genomic: ACTAAT-CAAAGCA-TGGGAAGAAAGTGAAAAGTCCAAAGCAGATAACAAgtaagagctt ... tgatgatcagGTCTCACAAAAAGCTTTCAGCCATTTCAGCATGGGAAAAC
EST: TCACTAATCAAAGCATGGGAAGAAAGTGAAAAGTCCAAAGCAGATAACAA GTCTCACAAAAAGCTTTCAGCCATTTCAGCATGGGAAAACAGCAAGAAAGCEST: gi|6455721|gb|AW186404.1|AW186404
genomic: TCACTAATCAAAGCATGGGAAGAAAGTGAAAAGTCCAAAGCAGATAACAAgtaagagctt ... tgatgatcagGTCTCACAAAAAGCTTTCAGCCATTTCAGCATGGGAAAACAGCAAGAAAGC
EST: TCACTAATCAAAGCATGGGAAGAAAGTGAAAAGTCCAAAGCAGATAACAA GTCTCACAAAAAGCTTTCAGCCATTTCAGCATGGGAAAACAGCAAGAAAGCEST: gi|11412933|gb|BF424944.1|BF424944
genomic: TCACTAATCAAAGCATGGGAAGAAAGTGAAAAGTCCAAAGCAGATAACAAgtaagagctt ... tgatgatcagGTCTCACAAAAAGCTTTCAGCCATTTCAGCATGGGAAAACAGCAAGAAAGC
EST: TCACTAATCAAAGCATGGGAAGAAAGTGAAAAGTCCAAAGCAGATAACAA GTCTCACAAAAAGCTNTCAGCCATTTCAGCATGGGAAAACAGCAAGAAAGCEST: gi|17400561|gb|BM177343.1|BM177343
genomic: TCACTAATCAAAGCATGGGAAGAAAGTGAAAAGTCCAAAGCAGATAACAAgtaagagctt ... tgatgatcagGTCTCACAAAAAGCTTTCAGCCATTTCAGCATGGGAAAACAGCAAGAAAGC
EST: TCACTAATCAAAGCATGGGAAGAAAGTGAAAAGTCCAAAGCAGATAACAA GTCTCACAAAAAGCTTTCAGCCATTTCAGCATGGGAAAACAGCAAGAAAGC
genomic: TCACTAATCAAAGCATGGGAAGAAAGTGAAAAGTCCAAAGCAGATAACAAgtaagagctt ... tgatgatcagGTCTCACAAAAAGCTTTCAGCCATTTCAGCATGGGAAAACAGCAAGAAAGC
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| ATGCTGTGCTTGCAAGAGTTGCAACCGAGAAGAGGCTGTCACTAATCAAAGCATGGGAAGAAAGTGAAAAGTCCAAAGCAGATAACAAgtaagagcttgcaccacctccataactatctatgctggtttagcatttcatgtggactcagttctattcataactatggggatcaataaaaaaaaaggga
- - - - - - - - - - - - - - - - - - - - - - - - - - - GGAAGA
- - - - - - - - - - - - - - - - - - - - - - - - - - - - AAGAAA
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - GCAGAT
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -caccacc
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -aaaaaaaa