1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' |
CCTAGACTATCCTTTTAAGCCCCCCCAAGTGAAGTTTGAGACAATGTGCTTTCATCCAAATGTTGACCAGTTTGGCAACATTTGTCTGGACATTCTTCAGgtattcatgaacctagagaacaaaagagaatgtcttagagccaaaatttccattatctgtgtcttttggtgggtctgaatctaccatttagtttttacta...
species | Glycine max |
transcript | GLYMA10G35630.1 |
intron # | 3 |
splice site | 5' |
intron type | U2 |
EST: TTCATCCAAATGTTGACCAGTTTGGCAACATTTGTCTGGACATTCTTCAG GACAAGTGGTCTTCAGCTTATGATTGCAGAACTATTCTTCTGTCTATTCAAEST: gi|20498328|gb|BQ273258.1|BQ273258
genomic: TTCATCCAAATGTTGACCAGTTTGGCAACATTTGTCTGGACATTCTTCAGgtattcatga ... ctttctacagGACAAGTGGTCTTCAGCTTATGATTGCAGAACTATTCTTCTGTCTATTCAA
EST: TTCATCCAAATGTTGACCAGTTTGGCAACATTTGTCTGGACATTCTTCAG GACAAGTGGTCTTCAGCTTATGATTGCAGAACTATTCTTCTGTCTATTCAAEST: gi|298170252|gb|HO018876.1|HO018876
genomic: TTCATCCAAATGTTGACCAGTTTGGCAACATTTGTCTGGACATTCTTCAGgtattcatga ... ctttctacagGACAAGTGGTCTTCAGCTTATGATTGCAGAACTATTCTTCTGTCTATTCAA
EST: TTCATCCAAATGTTGACCAGTTTGGCAACATTTGTCTGGACATTCTTCAG GACAAGTGGTCTTCAGCTTATGATTGCAGAACTATTCTTCTGTCTATTCAAEST: gi|193611998|gb|FK563597.1|FK563597
genomic: TTCATCCAAATGTTGACCAGTTTGGCAACATTTGTCTGGACATTCTTCAGgtattcatga ... ctttctacagGACAAGTGGTCTTCAGCTTATGATTGCAGAACTATTCTTCTGTCTATTCAA
EST: TCCAAATGTTGACCAGTTTGGCAACATTTGTCTGGACATTCTTCAG GACAAGTGGTCTTCAGCTTATGATTGCAGAACTATTCTTCTGTCTATTCAAEST: gi|254326455|gb|GR841047.1|GR841047
genomic: TCCAAATGTTGACCAGTTTGGCAACATTTGTCTGGACATTCTTCAGgtattcatga ... ctttctacagGACAAGTGGTCTTCAGCTTATGATTGCAGAACTATTCTTCTGTCTATTCAA
EST: TTCATCCAAATGTTGACCAGTTTGGCAACATTTGTCTGGACATTCTTCAG -ACAAGTGGTCTTCAGCTTATGATTGCAGAACTATTCTTCTGTCTATTCAAEST: gi|254331851|gb|GR846161.1|GR846161
genomic: TTCATCCAAATGTTGACCAGTTTGGCAACATTTGTCTGGACATTCTTCAGgtattcatga ... ctttctacagGACAAGTGGTCTTCAGCTTATGATTGCAGAACTATTCTTCTGTCTATTCAA
EST: TTCATCCAAATGTTGACCAGTTTGGCAACATTTGTCTGGACATTCTTCAG GACAAGTGGTCTTCAGCTTATGATTGCAGAACTATTCTTCTGTCTATTCAA
genomic: TTCATCCAAATGTTGACCAGTTTGGCAACATTTGTCTGGACATTCTTCAGgtattcatga ... ctttctacagGACAAGTGGTCTTCAGCTTATGATTGCAGAACTATTCTTCTGTCTATTCAA
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| CCTAGACTATCCTTTTAAGCCCCCCCAAGTGAAGTTTGAGACAATGTGCTTTCATCCAAATGTTGACCAGTTTGGCAACATTTGTCTGGACATTCTTCAGgtattcatgaacctagagaacaaaagagaatgtcttagagccaaaatttccattatctgtgtcttttggtgggtctgaatctaccatttagtttttacta
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