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Data associated with selected splice site

Sequence

 atgc   intronic sequence     ATGC   exonic sequence

TCATCACTGCTTGTGGATAAATAACTGTGTTGGCTATTGGAATTATAAGACATTCTTTGTTTTTGTATTCTATGCCACCATGGCAAGTATTTATTCTACGgtatgtttccaatctggcatctactgtttctgtactgaacaggattcctatttgacataagcttttaaaatgtgcag

Basic information

species Glycine max
transcript GLYMA10G35270.2
intron # 3
splice site 5'
intron type U2

Orthologous splice sites


 atgc   intronic sequence     ATGC   exonic sequence


upper sequence: GLYMA10G35270.2 (Glycine max), 5'ss of exon 3
lower sequence: Vv13s0019g04670.t01 (Vitis vinifera), 5'ss of exon 3
TCATCACTGCTTGTGGATAAATAACTGTGTTGGCTATTGGAATTATAAGACATTCTTTGTTTTTGTATTCTATGCCACCATGGCAAGTATTTATTCTACGgtatgtttccaatctggcatctac----tgtttctgtactgaacag--gattcctatt-tgacataagcttttaaaa-tgtgcag
||| ||||| ||||||||||| || |||||||| |||||||| |||||| | ||  |  |  |||| || ||||| || || | ||| ||  | ||||||||||||||   || |||    | |    |||||   || |    ||  |  ||| ||| |||||  |||||||  |  |    ||
TCACCACTGTTTGTGGATAAACAATTGTGTTGGTTATTGGAACTATAAGGCCTTTGTGATGCTTGTCTTATATGCAACTATTGGAAGCATCCACTCTACGgtatgttt--gatttggttctttccccttgttttaatattatctagttgtctccaattatgacagtagcttttctacctacatag