1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' |
GCTATTGCCACTGCAAGGATGATAGGCGAGTTCCCAGAAAGAATAGGGCAACCAGAATGCCAGgcatgtactagtttctcaaccttttactgcagtgcagagcactaatttgtaattttgtatcttggcatgcatctttatttaaacattcaccaatcgtcataacaaagtgttttttttcccctgtctttccag
species | Glycine max |
transcript | GLYMA10G31370.3 |
intron # | 3 |
splice site | 5' |
intron type | U2 |
EST: CAAGGATGATAGGCGAGTTCCCAGAAAGAATAGGGCAACCAGAATGCCAG TACTATCTGAAGACAGGAACATGCAAATTTGGAGCCACATGCAAATTTCATEST: gi|17023405|gb|BM094439.1|BM094439
genomic: CAAGGATGATAGGCGAGTTCCCAGAAAGAATAGGGCAACCAGAATGCCAGgcatgtacta ... gtctttccagTACTATCTGAAGACAGGAACATGCAAATTTGGAGCCACATGCAAATTTCAT
EST: CAAGGATGATAGGCGAGTTCCCAGAAAGAATAGGGCAACCAGAATGCCAG TACTATCTGAAGACAGGAACATGCAAATTTGGAGCCACATGCAAATTTCATEST: gi|22522729|gb|BU081540.1|BU081540
genomic: CAAGGATGATAGGCGAGTTCCCAGAAAGAATAGGGCAACCAGAATGCCAGgcatgtacta ... gtctttccagTACTATCTGAAGACAGGAACATGCAAATTTGGAGCCACATGCAAATTTCAT
EST: CAAGGATGATAGGCGAGTTCCCAGAAAGAATAGGGCAACCAGAATGCCAG TACTATCTGAAGACAGGAACATGCAAATTTGGAGCCACATGCAAATTTCATEST: gi|298165142|gb|HO011191.1|HO011191
genomic: CAAGGATGATAGGCGAGTTCCCAGAAAGAATAGGGCAACCAGAATGCCAGgcatgtacta ... gtctttccagTACTATCTGAAGACAGGAACATGCAAATTTGGAGCCACATGCAAATTTCAT
EST: CAAGGATGATAGGCGAGTTCCCAGAAAGAATAGGGCAACCAGAATGCCAG TACTATCTGAAGACAGGAACATGCAAATTTGGAGCCACATGCAAATTTCATEST: gi|19270301|gb|BM886557.1|BM886557
genomic: CAAGGATGATAGGCGAGTTCCCAGAAAGAATAGGGCAACCAGAATGCCAGgcatgtacta ... gtctttccagTACTATCTGAAGACAGGAACATGCAAATTTGGAGCCACATGCAAATTTCAT
EST: CAAGGATGATAGGCGAGTTCCCAGAAAGAATAGGGCAACCAGAATGCCAG TACTATCTGAAGACAGGAACATGCAAATTTGGAGCCACATGCAAATTTCATEST: gi|23731682|gb|BU763980.1|BU763980
genomic: CAAGGATGATAGGCGAGTTCCCAGAAAGAATAGGGCAACCAGAATGCCAGgcatgtacta ... gtctttccagTACTATCTGAAGACAGGAACATGCAAATTTGGAGCCACATGCAAATTTCAT
EST: CAAGGATGATAGGCGAGTTCCCAGAAAGAATAGGGCAACCAGAATGCCAG TACTATCTGAAGACAGGAACATGCAAATTTGGAGCCACATGCAAATTTCAT
genomic: CAAGGATGATAGGCGAGTTCCCAGAAAGAATAGGGCAACCAGAATGCCAGgcatgtacta ... gtctttccagTACTATCTGAAGACAGGAACATGCAAATTTGGAGCCACATGCAAATTTCAT
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| GCTATTGCCACTGCAAGGATGATAGGCGAGTTCCCAGAAAGAATAGGGCAACCAGAATGCCAGgcatgtactagtttctcaaccttttactgcagtgcagagcactaatttgtaattttgtatcttggcatgcatctttatttaaacattcaccaatcgtcataacaaagtgttttttttcccctgtctttccag
- - - - - - - AGGATG
- - - - - - - - - - - - - - - - - - AAAGAA