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Data associated with selected splice site

Sequence

 atgc   intronic sequence     ATGC   exonic sequence

ACATTCTGTTGTGATCTTTCCACTAATGGATTCCCGAACTGGTTGGCGTGCAATCCTTCCCAAGATAATTTTTTACAGAAACAGTCATACTGCTTATCAGgttgctttgctttacctttatgctgctgatttgtactgatttatgcaatggctccataagaatttgtacttggttctttatgtttttctccag

Basic information

species Glycine max
transcript GLYMA10G31030.2
intron # 3
splice site 5'
intron type U2

Mapped EST sequences

Showing partial alignments of ESTs and genomic sequences. See full alignments


 ATGC     EST sequence
 ATGC     genomic sequence (exon)
 ATGC     genomic sequence (truncated intron)


EST: gi|16997128|gb|BM086500.1|BM086500
EST:     CAATCCTTCCCAAGATAATTTTTTACAGAAACAGTCATACTGCTTATCAG                         GTGTCAGAGAGGATAATGGGCTGCAT
genomic: CAATCCTTCCCAAGATAATTTTTTACAGAAACAGTCATACTGCTTATCAGgttgctttgc ... ttttctccagGTGTCAGAGAGGATAATGGGCTGCAT
EST: gi|51335064|gb|CO978930.1|CO978930
EST:     GATAATTTTTTACAGAAACAGTCATACTGCTTATCAG                         GTGTCAGAGAGGATAATGGGCTGCATTTTACCAATCTGTNNCCCTCGGAAG
genomic: GATAATTTTTTACAGAAACAGTCATACTGCTTATCAGgttgctttgc ... ttttctccagGTGTCAGAGAGGATAATGGGCTGCATTTTACCAATCTGTCTCCCTCGGAAG