1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' |
GAACTTGCAGGGGATGTTGTTCAGAATCTTAAAGAATATTTCAGAGCAATGTACAAGAAGgtacatgatccctttttctcccaatgccttgtgatatacttgtaatctgtgtagctgatatattgtaatatatgctaaatag
species | Glycine max |
transcript | GLYMA10G12350.2 |
intron # | 3 |
splice site | 5' |
intron type | U2 |
EST: GGGATGTTGTTCAGAATCTTAAAGAATATTTCAGAGCAATGTACAAGAAG GTCACTGAAGCTGATATTGAGGAATTTGAAGCAAACTATAGGGGGTCTGACEST: gi|193556711|gb|FK511920.1|FK511920
genomic: GGGATGTTGTTCAGAATCTTAAAGAATATTTCAGAGCAATGTACAAGAAGgtacatgatc ... tgctaaatagGTCACTGAAGCTGATATTGAGGAATTTGAAGCAAACTATAGGGGGTCTGAC
EST: GGGATGTTGTTCAGAATCTTAAAGAATATTTCAGAGCAATGTACAAGAAG GTCACTGAAGCTGATATTGAGGAATTTGAAGEST: gi|207787948|gb|GD762544.1|GD762544
genomic: GGGATGTTGTTCAGAATCTTAAAGAATATTTCAGAGCAATGTACAAGAAGgtacatgatc ... tgctaaatagGTCACTGAAGCTGATATTGAGGAATTTGAAG
EST: GGATGTTGTTTCAGAATCTTAAAGAATATTTCAGAGCAATGTACAAGAAG GTCACTGAAGCTGATATTGAGGAATTTGAAGCAAACTATAGGGGGTCTGACEST: gi|193479469|gb|FK444254.1|FK444254
genomic: GGATGTTG-TTCAGAATCTTAAAGAATATTTCAGAGCAATGTACAAGAAGgtacatgatc ... tgctaaatagGTCACTGAAGCTGATATTGAGGAATTTGAAGCAAACTATAGGGGGTCTGAC
EST: GGGATGTTGTTCAGAATCTTAAAGAATATTTCAGAGCAATGTACAAGAAG GTCACTGAAGCTGATATTGAGAAATTTGAAGCAAACTATAGGGGGTCTGACEST: gi|208130358|gb|GD928131.1|GD928131
genomic: GGGATGTTGTTCAGAATCTTAAAGAATATTTCAGAGCAATGTACAAGAAGgtacatgatc ... tgctaaatagGTCACTGAAGCTGATATTGAGGAATTTGAAGCAAACTATAGGGGGTCTGAC
EST: AATCTTAAAGAATATTTCAGAGCAATGTACAAGAAG GTTACTGAAGCTGATATTGAGGAATTTGAAGCAAACTATAGGGGGTCTGACEST: gi|16346108|gb|BI971703.1|BI971703
genomic: AATCTTAAAGAATATTTCAGAGCAATGTACAAGAAGgtacatgatc ... tgctaaatagGTCACTGAAGCTGATATTGAGGAATTTGAAGCAAACTATAGGGGGTCTGAC
EST: GGGATGTTGTTCAGAATCTTAAAGAATATTTCAGAGCAATGTACAAGAAG GTCACTGAAGCTGATATTGAGGAATTTGAAGCAAACTATAGGGGGTCTGAC
genomic: GGGATGTTGTTCAGAATCTTAAAGAATATTTCAGAGCAATGTACAAGAAGgtacatgatc ... tgctaaatagGTCACTGAAGCTGATATTGAGGAATTTGAAGCAAACTATAGGGGGTCTGAC
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| GAACTTGCAGGGGATGTTGTTCAGAATCTTAAAGAATATTTCAGAGCAATGTACAAGAAGgtacatgatccctttttctcccaatgccttgtgatatacttgtaatctgtgtagctgatatattgtaatatatgctaaatag
- - - - - - - - - - - - - - - AAAGAA
- - - - - - - - - - - - - - - - - - - - - AGAGCA
- - - - - - - - - - - - - - - - - - - - - - - - - - - AAGAAG