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Data associated with selected splice site

Sequence

 atgc   intronic sequence     ATGC   exonic sequence

TGACTCTCTGGGAGGCATTGTTGACTGTACTGCAATACGGATTACTATTGACTCATGCTTATGCTCAAGACAAACGTTGGCCATATATTTCTCTACCTATgtatgtgcttctacttgcttctttttattatatttaaattaaaatttcatggtccaattgaatcttgattttgatgccttatattttatttaaag

Basic information

species Glycine max
transcript GLYMA10G02250.1
intron # 3
splice site 5'
intron type U2

Orthologous splice sites


 atgc   intronic sequence     ATGC   exonic sequence


upper sequence: GLYMA10G02250.1 (Glycine max), 5'ss of exon 3
lower sequence: AT2G47600.1 (Arabidopsis thaliana), 5'ss of exon 4
TGACTCTCTGGGAGGCATTGTTGACTGTACTGCAATACGGATTACTATTGACTCATGCTTATGCTCAAGACAAACGTTGGCCATATATTTCTCTACCTATgtatgtgcttctacttgcttct--ttttattatatttaaattaaaatttcatggtccaattgaatcttgattttgatgccttatattttatttaaag
| || ||   ||||||||| ||||| ||||||||||||||||| ||  |   |||||| || || |||||||| || ||||| ||  | ||| |||| ||||  ||   | | |  |    |  | ||| |   || ||| |  | ||  |       |||| |||||  | ||  |   | ||| ||         
TTACACTTGTGGAGGCATTATTGACAGTACTGCAATACGGATTGCTTCTAGTTCATGCGTACGCCCAAGACAAGCGATGGCCTTACTTGTCTTTACCAATgtgggtttcttttccagacaataatattagttccttcaaaatggatttctactaaa-gattgtatctttgtgtttgtatttgatacttgcag-----