1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' |
TCCGTTAAGAAGCCAACGGTTCGGGCTAAAGTTCCTTTTGAGAAAGGCTATAGTCAAATGGACTGGCTCAAGCTCACCCAAACACATCCTGACCTTGCAGgttctcatactcagtttttttactatgcaattgcaatcattatctttgttggctcgtctttcaaaatttcttccaattgcttagagctttgtaagagaaa...
species | Glycine max |
transcript | GLYMA09G36160.2 |
intron # | 3 |
splice site | 5' |
intron type | U2 |
EST: ACATCCTGACCTTGCAG GTCTGAAAGGGCAGTCAAACAAGAGACTTATTTCTATGGATGAAGTTAGAAEST: gi|151400158|gb|EV269972.1|EV269972
genomic: ACATCCTGACCTTGCAGgttctcatac ... cttgttccagGTCTGAAAGGGCAGTCAAACAAGAGACTTATTTCTATGGATGAAGTTAGAA
EST: TAGTCAAATGGACTGGCTCAAGCTCACCCAAACACATCCTGACCTTGCAG GTCTGAA-GGGCAGTCAAACAAGAGACTTATTTCTATGGATGAAGTTAGAAEST: gi|213620256|gb|DB961401.1|DB961401
genomic: TAGTCAAATGGACTGGCTCAAGCTCACCCAAACACATCCTGACCTTGCAGgttctcatac ... cttgttccagGTCTGAAAGGGCAGTCAAACAAGAGACTTATTTCTATGGATGAAGTTAGAA
EST: TAGTCAAATGGACTGGCTCAAGCTCACCCAAACACATCCTGACCTTGCAG GTCTGAAAGGGCAGTCAAACAAGAGACTTATTTCTATGGATGAAGTTAGAAEST: gi|298174703|gb|HO014734.1|HO014734
genomic: TAGTCAAATGGACTGGCTCAAGCTCACCCAAACACATCCTGACCTTGCAGgttctcatac ... cttgttccagGTCTGAAAGGGCAGTCAAACAAGAGACTTATTTCTATGGATGAAGTTAGAA
EST: TAGTCAAATGGACTGGCTCAAGCTCACCCAAACACATCCTGACCTTGCAG GTCTGAAAGGGCAGTCAAACAAGAGACTTATTTCTATGGATGAAGTTAGAAEST: gi|298171261|gb|HO016293.1|HO016293
genomic: TAGTCAAATGGACTGGCTCAAGCTCACCCAAACACATCCTGACCTTGCAGgttctcatac ... cttgttccagGTCTGAAAGGGCAGTCAAACAAGAGACTTATTTCTATGGATGAAGTTAGAA
EST: TAGTCAAATGGACTGGCTCAAGCTCACCCAAACACATCCTGACCTTGCAG GTCTGAAAGGGCAGTCAAACAAGAGACTTATTTCTATGGATGAAGTTAGAA
genomic: TAGTCAAATGGACTGGCTCAAGCTCACCCAAACACATCCTGACCTTGCAGgttctcatac ... cttgttccagGTCTGAAAGGGCAGTCAAACAAGAGACTTATTTCTATGGATGAAGTTAGAA
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| TCCGTTAAGAAGCCAACGGTTCGGGCTAAAGTTCCTTTTGAGAAAGGCTATAGTCAAATGGACTGGCTCAAGCTCACCCAAACACATCCTGACCTTGCAGgttctcatactcagtttttttactatgcaattgcaatcattatctttgttggctcgtctttcaaaatttcttccaattgcttagagctttgtaagagaaa
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - CAAGCT
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - AGCTCA