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Data associated with selected splice site

Sequence

 atgc   intronic sequence     ATGC   exonic sequence

TCGGCCTGGACAAGGGAACATCAAATCCTTCATTGATGCTTTCTTTACCGCATGTACTTGTGGCGACCATTTCTTCATTCCTTTTTGGATACCATCTGGGgtttgtgctttcctaatttcttcttcttggtgcactctcttggattccttgctttagtctagaatccattgaagacttaaattttgatatttgatcttttgcgttctattcag

Basic information

species Glycine max
transcript GLYMA09G32510.1
intron # 3
splice site 5'
intron type U2

Mapped EST sequences

Showing partial alignments of ESTs and genomic sequences. See full alignments


 ATGC     EST sequence
 ATGC     genomic sequence (exon)
 ATGC     genomic sequence (truncated intron)


EST: gi|209715803|gb|BW657438.1|BW657438
EST:     CATGTACTTGTGGCGACCATTTCTTCATTCCTTTTTGGATACCATCTGGG                         GGTTGTTAATGAACCACTTGAGAGCATTTCTGTGGATCTTGGCTTCCGTGG
genomic: CATGTACTTGTGGCGACCATTTCTTCATTCCTTTTTGGATACCATCTGGGgtttgtgctt ... ttctattcagGGTTGTTAATGAACCACTTGAGAGCATTTCTGTGGATCTTGGCTTCCGTGG
EST: gi|213598535|gb|DB964213.1|DB964213
EST:     CATGTACTTGTGGCGACCATTTCTTCATTCCTTTTTGGATACCATCTGGG                         GGTTGTTAATGAACCACTTGAGAGCATTTCTGTGGATCTTGGCTTCCGTGG
genomic: CATGTACTTGTGGCGACCATTTCTTCATTCCTTTTTGGATACCATCTGGGgtttgtgctt ... ttctattcagGGTTGTTAATGAACCACTTGAGAGCATTTCTGTGGATCTTGGCTTCCGTGG
EST: gi|209722262|gb|BW662407.1|BW662407
EST:     CATGTACTTGTGGCGACCATTTCTTCATTCCTTTTTGGATACCATCTGGG                         GGTTGTTAATGAACCACTTGAGAGCATTTCTGTGGATCTTGGCTTCCGTGG
genomic: CATGTACTTGTGGCGACCATTTCTTCATTCCTTTTTGGATACCATCTGGGgtttgtgctt ... ttctattcagGGTTGTTAATGAACCACTTGAGAGCATTTCTGTGGATCTTGGCTTCCGTGG