Skip to another splice site:
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 5'  3'   		2  
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 5'  3'   

Data associated with selected splice site

Sequence

 atgc   intronic sequence     ATGC   exonic sequence

GGTGTTGAGGCTTCAGAAGGGACACAAGTATTGTGTGCTGGGCAGGTTGTCATCTGAAGTTGGATGGAGCTACTATGATACCATTAGGgtaagtgtttgccttgtgagaggttttgctatcttaatatttcaaaatgtgcattttctacaactgatcaacatattttaatataatctcattgctcatt...

Basic information

species Glycine max
transcript GLYMA09G02790.1
intron # 3
splice site 5'
intron type U2

Mapped EST sequences

Showing partial alignments of ESTs and genomic sequences. See full alignments


 ATGC     EST sequence
 ATGC     genomic sequence (exon)
 ATGC     genomic sequence (truncated intron)


EST: gi|120492937|gb|EH221104.1|EH221104
EST:     TGGGCAGGTTGTCATCTGAAGTTGGATGGAGCTACTATGATACCATTAGG                         GAGCTGGAGAAGAAGAGAAAGGAGAAGGCAGCGGTGGTTTACGAGAGAAAG
genomic: TGGGCAGGTTGTCATCTGAAGTTGGATGGAGCTACTATGATACCATTAGGgtaagtgttt ... ttgctcacagGAGCTGGAGAAGAAGAGAAAGGAGAAGGCAGCGGTGGTTTACGAGAGAAAG
EST: gi|209708662|gb|BW678839.1|BW678839
EST:     TGGGCAGGTTGTCATCTGAAGTTGGATGGAGCTACTATGATACCATTAGG                         GAGCTGGAGAAGAAGAGAAAGGAGAAGGCAGCGGTGGTTTACGAGAGAAA
genomic: TGGGCAGGTTGTCATCTGAAGTTGGATGGAGCTACTATGATACCATTAGGgtaagtgttt ... ttgctcacagGAGCTGGAGAAGAAGAGAAAGGAGAAGGCAGCGGTGGTTTACGAGAGAAA
EST: gi|209700950|gb|BW661317.1|BW661317
EST:     TGGGCAGGTTGTCATCTGAAGTTGGATGGAGCTACTATGATACCATTAGG                         GAGCTGGAGAAGAAGAGAAAGGAGAAGGCAGCGGTGGTTTACGAGAGAAAG
genomic: TGGGCAGGTTGTCATCTGAAGTTGGATGGAGCTACTATGATACCATTAGGgtaagtgttt ... ttgctcacagGAGCTGGAGAAGAAGAGAAAGGAGAAGGCAGCGGTGGTTTACGAGAGAAAG
EST: gi|10845453|gb|BF068572.1|BF068572
EST:     TGGGCAGGTTGTCATCTGAAGTTGGATGGAGCTACTATGATACCATTAGG                         GAGCTGGAGAAGAAGAGAAAGGAGAAGGCAGCGGTGGTTTACGAGAGAAAG
genomic: TGGGCAGGTTGTCATCTGAAGTTGGATGGAGCTACTATGATACCATTAGGgtaagtgttt ... ttgctcacagGAGCTGGAGAAGAAGAGAAAGGAGAAGGCAGCGGTGGTTTACGAGAGAAAG
EST: gi|11688306|gb|BF595982.1|BF595982
EST:     TGGGCAGGTTGTCATCTGAAGTTGGATGGAGCTACTATGATACCATTAGG                         GAGCTGGAGAAGAAGAGAAAGGAGAAGGCAGCGGTGGTTTACGAGAGAAAG
genomic: TGGGCAGGTTGTCATCTGAAGTTGGATGGAGCTACTATGATACCATTAGGgtaagtgttt ... ttgctcacagGAGCTGGAGAAGAAGAGAAAGGAGAAGGCAGCGGTGGTTTACGAGAGAAAG
EST: gi|11413396|gb|BF425407.1|BF425407
EST:     TGGGCAGGTTGTCATCTGAAGTTGGATGGAGCTACTATGATACCATTAGG                         GAGCTGGAGAAGAAGAGAAAGGAGAAGGCAGCGGTGGTTTACGAGAGAAAG
genomic: TGGGCAGGTTGTCATCTGAAGTTGGATGGAGCTACTATGATACCATTAGGgtaagtgttt ... ttgctcacagGAGCTGGAGAAGAAGAGAAAGGAGAAGGCAGCGGTGGTTTACGAGAGAAAG
EST: gi|298192962|gb|HO033396.1|HO033396
EST:     TGGGCAGGTTGTCATCTGAAGTTGGATGGAGCTACTATGATACCATTAGG                         GAGCTGGAGAAGAAGAGAAAGGA
genomic: TGGGCAGGTTGTCATCTGAAGTTGGATGGAGCTACTATGATACCATTAGGgtaagtgttt ... ttgctcacagGAGCTGGAGAAGAAGAGAAAGGA
EST: gi|58019129|gb|CX705871.1|CX705871
EST:     TGGGCAGGTTGTCATCTGAAGTTGGATGGAGCTACTATGATACCATTAGG                         GAGCTGGAGAAGAAGAGAAAGGAGAAGGCAGCGGTGGTTTACGAGAGAAAG
genomic: TGGGCAGGTTGTCATCTGAAGTTGGATGGAGCTACTATGATACCATTAGGgtaagtgttt ... ttgctcacagGAGCTGGAGAAGAAGAGAAAGGAGAAGGCAGCGGTGGTTTACGAGAGAAAG
EST: gi|254345112|gb|GR851488.1|GR851488
EST:     TGGGCAGGTTGTCATCTGAAGTTGGATGGAGCTACTATGATACCATTAGG                         GAGCTGGAGAAGAAGAGAAAGGAGAAGGCAGCGGTGGTTTACGAGAGAAAG
genomic: TGGGCAGGTTGTCATCTGAAGTTGGATGGAGCTACTATGATACCATTAGGgtaagtgttt ... ttgctcacagGAGCTGGAGAAGAAGAGAAAGGAGAAGGCAGCGGTGGTTTACGAGAGAAAG
EST: gi|48575427|gb|CO036398.1|CO036398
EST:     CTACTATGATACCATTAGG                         GAGCTGGAGAAGAAGAGAAAGGAGAAGGCAGCGGTGGTTTACGAGAGAAAG
genomic: CTACTATGATACCATTAGGgtaagtgttt ... ttgctcacagGAGCTGGAGAAGAAGAGAAAGGAGAAGGCAGCGGTGGTTTACGAGAGAAAG
EST: gi|120493991|gb|EH222158.1|EH222158
EST:     TGGGCAGGTTGTCATCTGAAGTTGGATGGAGCTACTATGATACCATTAGG                         GAGCTGGAGAAGAAGAGAAAGGAGAAGGCAGCGGTGGTTTACGAGAGAAAG
genomic: TGGGCAGGTTGTCATCTGAAGTTGGATGGAGCTACTATGATACCATTAGGgtaagtgttt ... ttgctcacagGAGCTGGAGAAGAAGAGAAAGGAGAAGGCAGCGGTGGTTTACGAGAGAAAG
EST: gi|193518630|gb|FK472715.1|FK472715
EST:     TGGGCAGGTTGTCATCTGAAGTTGGATGGAGCTACTATGATACCATTAGG                         GAGCTGGAGAAGAAGAGAAAGGAGAAGGCAGCGGTGGTTTACGAGAGAAAG
genomic: TGGGCAGGTTGTCATCTGAAGTTGGATGGAGCTACTATGATACCATTAGGgtaagtgttt ... ttgctcacagGAGCTGGAGAAGAAGAGAAAGGAGAAGGCAGCGGTGGTTTACGAGAGAAAG
EST: gi|13180779|gb|BG352119.1|BG352119
EST:     TGGGCAGGTTGTCATCTGAAGTTGGATGGAGCTACTATGATACCATTAGG                         GAGCTGGAGAAGAAGAGAAAGGAGAAGGCAGCGGTGGTTTACGAAGAGAAA
genomic: TGGGCAGGTTGTCATCTGAAGTTGGATGGAGCTACTATGATACCATTAGGgtaagtgttt ... ttgctcacagGAGCTGGAGAAGAAGAGAAAGGAGAAGGCAGCGGTGGTTTACGA-GAGAAA
EST: gi|20075807|gb|BQ094590.1|BQ094590
EST:     TGGGCAGGTTGTCATCTGAAGTTGGATGGAGCTACTATGATACCATTAGG                         GAGCTGGAGAAGAAGAGAAAGGAGAAGGCAGCGGTGGTTTACGAGAGAAAG
genomic: TGGGCAGGTTGTCATCTGAAGTTGGATGGAGCTACTATGATACCATTAGGgtaagtgttt ... ttgctcacagGAGCTGGAGAAGAAGAGAAAGGAGAAGGCAGCGGTGGTTTACGAGAGAAAG
EST: gi|151408381|gb|EV278189.1|EV278189
EST:     TGGGCAGGTTGTCATCTGAAGTTGGATGGAGCTACTATGATACCATTAGG                         GAGCTGGAGAAGAAGAGAAAGGAGAAGGCAGCGGTGGTTTACGAGAGAAAG
genomic: TGGGCAGGTTGTCATCTGAAGTTGGATGGAGCTACTATGATACCATTAGGgtaagtgttt ... ttgctcacagGAGCTGGAGAAGAAGAGAAAGGAGAAGGCAGCGGTGGTTTACGAGAGAAAG
EST: gi|14990945|gb|BI316618.1|BI316618
EST:     TGGGCAGGTTGTCATCTGAAGTTGGATGGAGCTACTATGATACCATTAGG                         GAGCTGGAGAAGAAGAGAAAGGAGAAGGCAGCGGTGGTTTACCAGAGAAAG
genomic: TGGGCAGGTTGTCATCTGAAGTTGGATGGAGCTACTATGATACCATTAGGgtaagtgttt ... ttgctcacagGAGCTGGAGAAGAAGAGAAAGGAGAAGGCAGCGGTGGTTTACGAGAGAAAG
EST: gi|18713999|gb|BM522755.1|BM522755
EST:     TGGGCAGGTTGTCATCTGAAGTTGGATGGAGCTACTATGATACCATTAGG                         GAGCTGGAGAAGAAGAGAAAGGAGAAGGCAGCGGTGGTTTACGAGAGAAAG
genomic: TGGGCAGGTTGTCATCTGAAGTTGGATGGAGCTACTATGATACCATTAGGgtaagtgttt ... ttgctcacagGAGCTGGAGAAGAAGAGAAAGGAGAAGGCAGCGGTGGTTTACGAGAGAAAG
EST: gi|192328024|gb|FK021770.1|FK021770
EST:     TGGGCAGGTTGTCATCTGAAGTTGGATGGAGCTACTATGATACCATTAGG                         GAGCTGGAGAAGAAGAGAAAGGAGAAGGCAGCGGTGGTTTACGAGAGAAAG
genomic: TGGGCAGGTTGTCATCTGAAGTTGGATGGAGCTACTATGATACCATTAGGgtaagtgttt ... ttgctcacagGAGCTGGAGAAGAAGAGAAAGGAGAAGGCAGCGGTGGTTTACGAGAGAAAG
EST: gi|209700949|gb|BW661316.1|BW661316
EST:     TGGGCAGGTTGTCATCTGAAGTTGGATGGAGCTACTATGATACCATTAGG                         GAGCTGGAGAAGAAGAGAAAGGAGAAGGCAGCGGTGGTTTACGA
genomic: TGGGCAGGTTGTCATCTGAAGTTGGATGGAGCTACTATGATACCATTAGGgtaagtgttt ... ttgctcacagGAGCTGGAGAAGAAGAGAAAGGAGAAGGCAGCGGTGGTTTACGA
EST: gi|151396042|gb|EV265919.1|EV265919
EST:     TGGGCAGGTTGTCATCTGAAGTTGGATGGAGCTACTATGATACCATTAGG                         GAGCTGGAGAAGAAGAGAAAGGAGAAGGCAGCGGTGGTTTACGAGAGAAAG
genomic: TGGGCAGGTTGTCATCTGAAGTTGGATGGAGCTACTATGATACCATTAGGgtaagtgttt ... ttgctcacagGAGCTGGAGAAGAAGAGAAAGGAGAAGGCAGCGGTGGTTTACGAGAGAAAG
EST: gi|254331326|gb|GR843338.1|GR843338
EST:     TGGGCAGGTTGTCATCTGAAGTTGGATGGAGCTACTATGATACCATTAGG                         GAGCTGGAGAAGAAGAGAAAGGAGAAGGCAGCGGTGGTTTACGAGAGAAAG
genomic: TGGGCAGGTTGTCATCTGAAGTTGGATGGAGCTACTATGATACCATTAGGgtaagtgttt ... ttgctcacagGAGCTGGAGAAGAAGAGAAAGGAGAAGGCAGCGGTGGTTTACGAGAGAAAG
EST: gi|193406596|gb|FK375555.1|FK375555
EST:     CTGAAGTTTGGATGGAGCTACTATGATACCATTAGG                         GAGCTGGAGAAGAAGAGAAAGGAGAAGGCAGCGGTGGTTTACGAGAGAAAG
genomic: CTGAAG-TTGGATGGAGCTACTATGATACCATTAGGgtaagtgttt ... ttgctcacagGAGCTGGAGAAGAAGAGAAAGGAGAAGGCAGCGGTGGTTTACGAGAGAAAG
EST: gi|8825706|gb|BE209499.1|BE209499
EST:     TGGGCAGGTTGTCATCTGAAGTTGGATGGAGCTACTATGATACCATTAGG                         GAGCTGGAGAAGAAGAGAAAGGAGAAGGCAGCGGTGGTTTACGAGAGAAAG
genomic: TGGGCAGGTTGTCATCTGAAGTTGGATGGAGCTACTATGATACCATTAGGgtaagtgttt ... ttgctcacagGAGCTGGAGAAGAAGAGAAAGGAGAAGGCAGCGGTGGTTTACGAGAGAAAG
EST: gi|26060102|gb|CA803016.1|CA803016
EST:     TGGGCAGGTTGTCATCTGAAGTTGGATGGAGCTACTATGATACCATTAGG                         GAGCTGGAGAAGAAGAGAAAGGAGAAGGCAGCGGTGGTTTACGAGAGAAAG
genomic: TGGGCAGGTTGTCATCTGAAGTTGGATGGAGCTACTATGATACCATTAGGgtaagtgttt ... ttgctcacagGAGCTGGAGAAGAAGAGAAAGGAGAAGGCAGCGGTGGTTTACGAGAGAAAG
EST: gi|192294449|gb|FG987378.1|FG987378
EST:     TGGGCAGGTTGTCATCTGAAGTTGGATGGAGCTACTATGATACCATTAGG                         GAGCTGGAGAAGAAGAGAAAGGAGAAGGCAGCGGTGGTTTACGAGAGAAAG
genomic: TGGGCAGGTTGTCATCTGAAGTTGGATGGAGCTACTATGATACCATTAGGgtaagtgttt ... ttgctcacagGAGCTGGAGAAGAAGAGAAAGGAGAAGGCAGCGGTGGTTTACGAGAGAAAG
EST: gi|6846057|gb|AW348347.1|AW348347
EST:     TGGGCAGGTTGTCATCTGAAGTTGGATGGAGCTACTATGATACCATTAGG                         GAGCTGGAGAAGAAGAGAAAGGAGAAGGCAGCGGTGGTTTACGAGAGAAAG
genomic: TGGGCAGGTTGTCATCTGAAGTTGGATGGAGCTACTATGATACCATTAGGgtaagtgttt ... ttgctcacagGAGCTGGAGAAGAAGAGAAAGGAGAAGGCAGCGGTGGTTTACGAGAGAAAG
EST: gi|4313752|gb|AI460871.1|AI460871
EST:     TGNGCAGGTTGTCATCTGAAGTTGGATGGAGCTACTATGATACCATTATG                         GAGCTGGAGAAGATGAGATAGGAGAATGCAGCGGGTG-TTTACGAGAGAAA
genomic: TGGGCAGGTTGTCATCTGAAGTTGGATGGAGCTACTATGATACCATTAGGgtaagtgttt ... ttgctcacagGAGCTGGAGAAGAAGAGAAAGGAGAAGGCAGCGG-TGGTTTACGAGAGAAA
EST: gi|7232973|gb|AW568324.1|AW568324
EST:     GGGCCAAGT-GTCATCTGAAGTTGGATGGAGCTACTATGATACCATTAGG                         GAGCTGGAGAATAAGAGA
genomic: GGGC-AGGTTGTCATCTGAAGTTGGATGGAGCTACTATGATACCATTAGGgtaagtgttt ... ttgctcacagGAGCTGGAGAAGAAGAGA
EST: gi|21601180|gb|BQ611511.1|BQ611511
EST:     GGAGCTACTATGATACCATTAGG                         GAGCTGGAGAAGAAGAGAAAGGAGAAGGCAGCGGTGGTTTACGAGAGAAAG
genomic: GGAGCTACTATGATACCATTAGGgtaagtgttt ... ttgctcacagGAGCTGGAGAAGAAGAGAAAGGAGAAGGCAGCGGTGGTTTACGAGAGAAAG
EST: gi|16997203|gb|BM086575.1|BM086575
EST:     TGGGCAGGTTGTCATCTGAAGTTGGATGGAGCTACTATGATACCATTAGG                         GAGCTGGAGAAGAAGAGAAAGGAGAAGGCAGCGGTGGTTTACGAGAGAAAG
genomic: TGGGCAGGTTGTCATCTGAAGTTGGATGGAGCTACTATGATACCATTAGGgtaagtgttt ... ttgctcacagGAGCTGGAGAAGAAGAGAAAGGAGAAGGCAGCGGTGGTTTACGAGAGAAAG
EST: gi|8827629|gb|BE211359.1|BE211359
EST:     TGGGCAGGTTGTCATCTGAAGTTGGATGGAGCTACTATGATACCATTAGG                         GAGCTGGAGAAGAAGAGAAAGGAGAAGGCAGCGGTGGTTTACGAGAGAAAG
genomic: TGGGCAGGTTGTCATCTGAAGTTGGATGGAGCTACTATGATACCATTAGGgtaagtgttt ... ttgctcacagGAGCTGGAGAAGAAGAGAAAGGAGAAGGCAGCGGTGGTTTACGAGAGAAAG
EST: gi|19347245|gb|BM892125.1|BM892125
EST:     TGGGCAGGTTGTCATCTGAAGTTGGATGGAGCTACTATGATACCATTAGG                         GAGCTGGAGAAGAAGAGAAAGGAGAAGGCAGCGGTGGTTTACGAGAGAAAG
genomic: TGGGCAGGTTGTCATCTGAAGTTGGATGGAGCTACTATGATACCATTAGGgtaagtgttt ... ttgctcacagGAGCTGGAGAAGAAGAGAAAGGAGAAGGCAGCGGTGGTTTACGAGAGAAAG
EST: gi|193374342|gb|FK339322.1|FK339322
EST:     ATGGAGCTACTATGATACCATTTAGG                         GAGCTGGAGAAGAAGAGAAAGGAGAAGGCAGCGGTGGTTTACGAGAGAAA
genomic: ATGGAGCTACTATGATACCA-TTAGGgtaagtgttt ... ttgctcacagGAGCTGGAGAAGAAGAGAAAGGAGAAGGCAGCGGTGGTTTACGAGAGAAA
EST: gi|192307103|gb|FK002727.1|FK002727
EST:     TGGGCAGGTTGTCATCTGAAGTTGGATGGAGCTACTATGATACCATTAGG                         GAGCTGGAGAAGAAGAGAAAGGAGAAGGCAGCGGTGGTTTACGAGAGAAAG
genomic: TGGGCAGGTTGTCATCTGAAGTTGGATGGAGCTACTATGATACCATTAGGgtaagtgttt ... ttgctcacagGAGCTGGAGAAGAAGAGAAAGGAGAAGGCAGCGGTGGTTTACGAGAGAAAG
EST: gi|192331549|gb|FK023425.1|FK023425
EST:     TGGGCAGGTTGTCATCTGAAGTTGGATGGAGCTACTATGATACCATTAGG                         GAGCTGGAGAAGAAGAGAAAGGAGAAG-CAGCGGTGGTTTACGAGAGAAAG
genomic: TGGGCAGGTTGTCATCTGAAGTTGGATGGAGCTACTATGATACCATTAGGgtaagtgttt ... ttgctcacagGAGCTGGAGAAGAAGAGAAAGGAGAAGGCAGCGGTGGTTTACGAGAGAAAG
EST: gi|58019326|gb|CX706068.1|CX706068
EST:     TGGGCAGGTTGTCATCTGAAGTTGGATGGAGCTACTATGATACCATTAGG                         GAGCTGGAGAAGAAGAGAAAGGAGAAGGCAGCGGTGGTTTACGAGAGAAAG
genomic: TGGGCAGGTTGTCATCTGAAGTTGGATGGAGCTACTATGATACCATTAGGgtaagtgttt ... ttgctcacagGAGCTGGAGAAGAAGAGAAAGGAGAAGGCAGCGGTGGTTTACGAGAGAAAG
EST: gi|4303703|gb|AI443514.1|AI443514
EST:     TGGGCAGGTTGTCATCTGAAGTTGGATGGAGCTACTATGATACCATTAGG                         GAGCTGGAGAAGAAGAGAAAGGAGAAGGCAGCGGTGGTTTCCGAGAAAAAG
genomic: TGGGCAGGTTGTCATCTGAAGTTGGATGGAGCTACTATGATACCATTAGGgtaagtgttt ... ttgctcacagGAGCTGGAGAAGAAGAGAAAGGAGAAGGCAGCGGTGGTTTACGAGAGAAAG
EST: gi|207809456|gb|GD780970.1|GD780970
EST:     TGGGCAGGTTGTCATCTGAAGTTGGATGGAGCTACTATGATACCATTAGG                         GAGCTGGAGAAGAAGAGAAAGGAGAAGGCAGCGGTGGTTTACGAGAGAAAG
genomic: TGGGCAGGTTGTCATCTGAAGTTGGATGGAGCTACTATGATACCATTAGGgtaagtgttt ... ttgctcacagGAGCTGGAGAAGAAGAGAAAGGAGAAGGCAGCGGTGGTTTACGAGAGAAAG
EST: gi|120493138|gb|EH221305.1|EH221305
EST:     TGGGCAGGTTGTCATCTGAAGTTGGATGGAGCTACTATGATACCATTAGG                         GAGCTGGAGAAGAAGAGAAAGGAGAAGGCAGCGGTGGTTTACGAGAGAAAG
genomic: TGGGCAGGTTGTCATCTGAAGTTGGATGGAGCTACTATGATACCATTAGGgtaagtgttt ... ttgctcacagGAGCTGGAGAAGAAGAGAAAGGAGAAGGCAGCGGTGGTTTACGAGAGAAAG
EST: gi|31306297|gb|CD391500.1|CD391500
EST:     TGGGCAGGTTGTCATCTGAAGTTGGATGGAGCTACTATGATACCATTAGG                         GAGCTGGAGAAGAAGAGAAAGGAGAAGGCAGCGGTGGTTTACGAGAGAAAG
genomic: TGGGCAGGTTGTCATCTGAAGTTGGATGGAGCTACTATGATACCATTAGGgtaagtgttt ... ttgctcacagGAGCTGGAGAAGAAGAGAAAGGAGAAGGCAGCGGTGGTTTACGAGAGAAAG
EST: gi|42723007|gb|CK768906.1|CK768906
EST:     TGGGCAGGTTGTCATCTGAAGTTGGATGGAGCTACTATGATACCATTAGG                         GAGCTGGAGAAGAAGAGAAAGGAGAAGGCAGCGGTGGTTTACGAGAGAAAG
genomic: TGGGCAGGTTGTCATCTGAAGTTGGATGGAGCTACTATGATACCATTAGGgtaagtgttt ... ttgctcacagGAGCTGGAGAAGAAGAGAAAGGAGAAGGCAGCGGTGGTTTACGAGAGAAAG
EST: gi|193531858|gb|FK488388.1|FK488388
EST:     GGGCAGGTTGTCATCTGAAGTTGGATGGAGCTACTATGATACCATTAAGG                         GAGCTGGAGAAGAAGAGAAAGGAGAAGGCAGCGGTGGTTTACGAGAGAAA
genomic: GGGCAGGTTGTCATCTGAAGTTGGATGGAGCTACTATGATACCATT-AGGgtaagtgttt ... ttgctcacagGAGCTGGAGAAGAAGAGAAAGGAGAAGGCAGCGGTGGTTTACGAGAGAAA
EST: gi|17024028|gb|BM095062.1|BM095062
EST:     TGGGCAGGTTGTCATCTGAAGTTGGATGGAGCTACTATGATACCATTAGG                         GAGCTGGAGAAGAANGAGAAAG
genomic: TGGGCAGGTTGTCATCTGAAGTTGGATGGAGCTACTATGATACCATTAGGgtaagtgttt ... ttgctcacagGAGCTGGAGAAGAA-GAGAAAG
EST: gi|20075731|gb|BQ094514.1|BQ094514
EST:     TGGGCAGGTTGTCATCTGAAGTTGGATGGAGCTACTATGATACCATTAGG                         GAGCTGGAGAAGAAGAGAAAGGAGAAGGCAGCGGTGGTTTACGAGAGAAAG
genomic: TGGGCAGGTTGTCATCTGAAGTTGGATGGAGCTACTATGATACCATTAGGgtaagtgttt ... ttgctcacagGAGCTGGAGAAGAAGAGAAAGGAGAAGGCAGCGGTGGTTTACGAGAGAAAG
EST: gi|193338371|gb|FK305174.1|FK305174
EST:     TGGGCAGGTTGTCATCTGAAGTTGGATGGAGCTACTATGGTACCATTAGG                         GAGCTGGAGAAGAAGAGAAAGGAGAAGGCAGCGGTGGTTTACGAGAGAAAG
genomic: TGGGCAGGTTGTCATCTGAAGTTGGATGGAGCTACTATGATACCATTAGGgtaagtgttt ... ttgctcacagGAGCTGGAGAAGAAGAGAAAGGAGAAGGCAGCGGTGGTTTACGAGAGAAAG
EST: gi|208170151|gb|GD968336.1|GD968336
EST:     GGAGCTACTATGATACCATTAGG                         GAGCTGGAGAAGAAGAGAAAGGAGAAGGCAGCGGTGGTTTACGAGAGAAAG
genomic: GGAGCTACTATGATACCATTAGGgtaagtgttt ... ttgctcacagGAGCTGGAGAAGAAGAGAAAGGAGAAGGCAGCGGTGGTTTACGAGAGAAAG
EST: gi|7924979|gb|AW831005.1|AW831005
EST:     TTGGCAGGTTGGCATCTGATGTTGGATAGAGCTACTATGATACCTTTAGG                         GTGCTGGATAAGAAGA
genomic: TGGGCAGGTTGTCATCTGAAGTTGGATGGAGCTACTATGATACCATTAGGgtaagtgttt ... ttgctcacagGAGCTGGAGAAGAAGA
EST: gi|207840476|gb|GD812629.1|GD812629
EST:     TGGGCAGGTTGTCATCTGAAGTTGGATGGAGCTACTATGATACCATTAGG                         GAGCTGGAGAAGAAGAGAAAGGAGAAGGCAGCGGTGGTTTACGAGAGAAAG
genomic: TGGGCAGGTTGTCATCTGAAGTTGGATGGAGCTACTATGATACCATTAGGgtaagtgttt ... ttgctcacagGAGCTGGAGAAGAAGAGAAAGGAGAAGGCAGCGGTGGTTTACGAGAGAAAG
EST: gi|58018845|gb|CX705587.1|CX705587
EST:     TGGGCAGGTTGTCATCTGAAGTTGGATGGAGCTACTATGATACCATTAGG                         GAGCTGGAGAAGAAGAGAAAGGAGAAGGCAGCGGTGGTTTACGAGAGAAAG
genomic: TGGGCAGGTTGTCATCTGAAGTTGGATGGAGCTACTATGATACCATTAGGgtaagtgttt ... ttgctcacagGAGCTGGAGAAGAAGAGAAAGGAGAAGGCAGCGGTGGTTTACGAGAGAAAG
EST: gi|193483526|gb|FK450165.1|FK450165
EST:     AAGTTGGATGGAGCTACTATGATACCATTAGG                         GAGCTGGAGAAGAAGAGAAAGTAGAAGGCAGCGGTGGTTTACGAGAGAAAG
genomic: AAGTTGGATGGAGCTACTATGATACCATTAGGgtaagtgttt ... ttgctcacagGAGCTGGAGAAGAAGAGAAAGGAGAAGGCAGCGGTGGTTTACGAGAGAAAG
EST: gi|20498735|gb|BQ273665.1|BQ273665
EST:     TGGGCAGGTTGTCATCTGAAGTTGGATGGAGCTACTATGATACCATTAGG                         GAGCTGGAGAAGAAGAGAAAAGAGAAGGCAGCGGTGGTTTACGAGAAAAAG
genomic: TGGGCAGGTTGTCATCTGAAGTTGGATGGAGCTACTATGATACCATTAGGgtaagtgttt ... ttgctcacagGAGCTGGAGAAGAAGAGAAAGGAGAAGGCAGCGGTGGTTTACGAGAGAAAG
EST: gi|5606895|gb|AI900993.1|AI900993
EST:     TGGGCAGGTTGTCATCTGAAGTTGGATGGAGCTACTATGATACCATTAGG                         GAGCTGGAGAAGAAGAGA
genomic: TGGGCAGGTTGTCATCTGAAGTTGGATGGAGCTACTATGATACCATTAGGgtaagtgttt ... ttgctcacagGAGCTGGAGAAGAAGAGA

Putative cis-regulatory sequences

 atgc intron ATGC exonic elements by Pertea et al.
 ATGC exon atgc putative intronic elements
 ATGC putative exonic elements identified for retained introns
        10        20        30        40        50        60        70        80        90        100       110       120       130       140       150       160       170       180       190       200       210       220 
---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| 
GGTGTTGAGGCTTCAGAAGGGACACAAGTATTGTGTGCTGGGCAGGTTGTCATCTGAAGTTGGATGGAGCTACTATGATACCATTAGGgtaagtgtttgccttgtgagaggttttgctatcttaatatttcaaaatgtgcattttctacaactgatcaacatattttaatataatctcattgctcatt

- - - - - - - - - - - - - - - - - - - - - - - - - -  CTGAAG
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - GATGGA
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -  GGAGCT