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Data associated with selected splice site

Sequence

 atgc   intronic sequence     ATGC   exonic sequence

CAACTGAGCCAACCTTGAGGGACAATGCGGTTTTGAGGCAGAAAGCACTTGTGCCTATGgtattctacattgacattactcgtttattattttaaaatgtttgtgttgtgtttgtcacttctctaatgattttggtgtttggattttcag

Basic information

species Glycine max
transcript GLYMA09G01270.1
intron # 3
splice site 5'
intron type U2

Mapped EST sequences

Showing partial alignments of ESTs and genomic sequences. See full alignments


 ATGC     EST sequence
 ATGC     genomic sequence (exon)
 ATGC     genomic sequence (truncated intron)


EST: gi|16346671|gb|BI972266.1|BI972266
EST:     CAACCTTGAGGGACAATGCGGTTTTGAGGCAGAAAGCACTTGTGCCTATG                         AGTAGTGTGGAGTTGCTTCTCCCTGTTGCTGTTGGGGACTACACCGATTTC
genomic: CAACCTTGAGGGACAATGCGGTTTTGAGGCAGAAAGCACTTGTGCCTATGgtattctaca ... ggattttcagAGTAGTGTGGAGTTGCTTCTCCCTGTTGCTGTTGGGGACTACACCGATTTC
EST: gi|18692857|gb|BM521705.1|BM521705
EST:     CAACCTTGAGGGACAATGCGGTTTTGAGGCAGAAAGCACTTGTGCCTATG                         AGTAGTGTGGAGTTGCTTCTCCCTGTTGCTGTTGGGGACTACACCGATTTC
genomic: CAACCTTGAGGGACAATGCGGTTTTGAGGCAGAAAGCACTTGTGCCTATGgtattctaca ... ggattttcagAGTAGTGTGGAGTTGCTTCTCCCTGTTGCTGTTGGGGACTACACCGATTTC
EST: gi|213616587|gb|DB967545.1|DB967545
EST:     CAACCTTGAGGGACAATGCGGTTTTGAGGCAGAAAGCACTTGTGCCTATG                         AGTAGTGTGGAGTTGCTTCTCCCCTGT-GCTGTTGGGGACTACACCGATTT
genomic: CAACCTTGAGGGACAATGCGGTTTTGAGGCAGAAAGCACTTGTGCCTATGgtattctaca ... ggattttcagAGTAGTGTGGAGTTGCTTCTCCC-TGTTGCTGTTGGGGACTACACCGATTT
EST: gi|254346898|gb|GR856620.1|GR856620
EST:     CAACCTTGAGGGACAATGCGGTTTTGAGGCAGAAAGCACTTGTGCCTATG                         AGTAGTGTGGAGTTGCTTCTCCCTGTTGCTGTTGGGGACTACACCGATTTC
genomic: CAACCTTGAGGGACAATGCGGTTTTGAGGCAGAAAGCACTTGTGCCTATGgtattctaca ... ggattttcagAGTAGTGTGGAGTTGCTTCTCCCTGTTGCTGTTGGGGACTACACCGATTTC
EST: gi|213594530|gb|DB957977.1|DB957977
EST:     CAACCTTGAGGGACAATGCGGTTTTGAGGCAGAAAGCACTTGTGCCTATG                         AGTAGTGTGGAGTTGCTTCTCCCTGTTGCTGTTGGGGACTACACCGATTTC
genomic: CAACCTTGAGGGACAATGCGGTTTTGAGGCAGAAAGCACTTGTGCCTATGgtattctaca ... ggattttcagAGTAGTGTGGAGTTGCTTCTCCCTGTTGCTGTTGGGGACTACACCGATTTC
EST: gi|213601975|gb|DB976222.1|DB976222
EST:     ACAATGCGGTTTTGAGGCAGAAAGCACTTGTGCCTATG                         AGTAGTGTAGAGTTGCTTCTCCCTGTTGCTGTTGGGGACTACACCGATTTC
genomic: ACAATGCGGTTTTGAGGCAGAAAGCACTTGTGCCTATGgtattctaca ... ggattttcagAGTAGTGTGGAGTTGCTTCTCCCTGTTGCTGTTGGGGACTACACCGATTTC
EST: gi|151410471|gb|EV280286.1|EV280286
EST:     CAACCTTGAGGGACAATGCGGTTTTGAGGCAGAAAGCACTTGTGCCTATG                         AGTAGTGTGGAGTTGCTTCTCCCTGTTGCTGTTGGGGACTACACCGATTTC
genomic: CAACCTTGAGGGACAATGCGGTTTTGAGGCAGAAAGCACTTGTGCCTATGgtattctaca ... ggattttcagAGTAGTGTGGAGTTGCTTCTCCCTGTTGCTGTTGGGGACTACACCGATTTC
EST: gi|19453154|gb|BM954564.1|BM954564
EST:     CAACCTTGAGGGACAATGCGGTTTTGAGGCAGAAAGCACTTGTGCCTATG                         AGTAGTGTGGAGTTGCTTCTCCCTGTTGCTGTTGGGGACTACACCGATTTC
genomic: CAACCTTGAGGGACAATGCGGTTTTGAGGCAGAAAGCACTTGTGCCTATGgtattctaca ... ggattttcagAGTAGTGTGGAGTTGCTTCTCCCTGTTGCTGTTGGGGACTACACCGATTTC
EST: gi|7924174|gb|AW830200.1|AW830200
EST:     CAACCTTGAGGGACAATGCGGTTTTGAGGCAGAAAGCACTTGTGCCTATG                         AGTAGTGTGGAGTTGCTTCTCCCTGTTGCTGTTGGGGACTACACCGATTTC
genomic: CAACCTTGAGGGACAATGCGGTTTTGAGGCAGAAAGCACTTGTGCCTATGgtattctaca ... ggattttcagAGTAGTGTGGAGTTGCTTCTCCCTGTTGCTGTTGGGGACTACACCGATTTC
EST: gi|16996748|gb|BM086120.1|BM086120
EST:     CAACCTTGAGGGACAATGCGGTTTTGAGGCAGAAAGCACTTGTGCCTATG                         AGTAGTGTGGAGTTGCTTCTCCCTGTTGCTGTTGGGGACTACACCGATTTC
genomic: CAACCTTGAGGGACAATGCGGTTTTGAGGCAGAAAGCACTTGTGCCTATGgtattctaca ... ggattttcagAGTAGTGTGGAGTTGCTTCTCCCTGTTGCTGTTGGGGACTACACCGATTTC
EST: gi|15664491|gb|BI701862.1|BI701862
EST:     CAACCTTGAGGGACAATGCGGTTTTGAGGCAGAAAGCACTTGTGCCTATG                         AGTAGTGTGGAGTTGCTTCTCCCTGTTGCTGTTGGGGACTACACCGATTTC
genomic: CAACCTTGAGGGACAATGCGGTTTTGAGGCAGAAAGCACTTGTGCCTATGgtattctaca ... ggattttcagAGTAGTGTGGAGTTGCTTCTCCCTGTTGCTGTTGGGGACTACACCGATTTC
EST: gi|192327116|gb|FK015508.1|FK015508
EST:     CAACCTTGAGGGACAATGCGGTTTTGAGGCAGAAAGCACTTGTGCCTATG                         AGTAGTGTGGAGTTGCTTCTCCCTGTTGCTGTTGGGGACTACACCGATTTC
genomic: CAACCTTGAGGGACAATGCGGTTTTGAGGCAGAAAGCACTTGTGCCTATGgtattctaca ... ggattttcagAGTAGTGTGGAGTTGCTTCTCCCTGTTGCTGTTGGGGACTACACCGATTTC