1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' |
TGCTGCTGACTGTTGGGATGCCGAGATTGAGTGCTCCTATGGTTGGATTGAGTGTGTTGGCATTGCCGATAGATCTGCATATGATTTGCGTGCTCACTCGgtaaccactctgctcaactctaaataatggcttctttgttgtaactttgataaattgtggggttgggttactgtaaaatcacaatgttttccttgcatca...
species | Glycine max |
transcript | GLYMA08G47890.1 |
intron # | 3 |
splice site | 5' |
intron type | U2 |
EST: GTTGGCATTGCCGATAGATCTGCATATGATTTGCGTGCTCACTCG GATAAAAGTGGTGTTCCGTTAGTGGCTCATGAAAAATTTGCAGAACCTAAGEST: gi|6916252|gb|AW397782.1|AW397782
genomic: GTTGGCATTGCCGATAGATCTGCATATGATTTGCGTGCTCACTCGgtaaccactc ... tatatcgcagGATAAAAGTGGTGTTCCGTTAGTGGCTCATGAAAAATTTGCAGAACCTAAG
EST: AGTGTGTTGGCATTGCCGATAGATCTGCATATGATTTGCGTGCTCACTCG GATAAAAGTGGTGTTCCGTTAGTGGCTCATGAAAAATTTGCAGAACCTAAGEST: gi|16104863|gb|BI892603.1|BI892603
genomic: AGTGTGTTGGCATTGCCGATAGATCTGCATATGATTTGCGTGCTCACTCGgtaaccactc ... tatatcgcagGATAAAAGTGGTGTTCCGTTAGTGGCTCATGAAAAATTTGCAGAACCTAAG
EST: AGTGTGTTGGCATTGCCGATAGATCTGCATATGATTTGCGTGCTCACTCG GATAAAAGTGGTGTTCCGTTAGTGGCTCATGAAAAATTTGCAGAACCTAAG
genomic: AGTGTGTTGGCATTGCCGATAGATCTGCATATGATTTGCGTGCTCACTCGgtaaccactc ... tatatcgcagGATAAAAGTGGTGTTCCGTTAGTGGCTCATGAAAAATTTGCAGAACCTAAG
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| TGCTGCTGACTGTTGGGATGCCGAGATTGAGTGCTCCTATGGTTGGATTGAGTGTGTTGGCATTGCCGATAGATCTGCATATGATTTGCGTGCTCACTCGgtaaccactctgctcaactctaaataatggcttctttgttgtaactttgataaattgtggggttgggttactgtaaaatcacaatgttttccttgcatca
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - ggggttg