1 5' 3' | 2 5' 3' | 3 5' 3' |
CCCTGTATTTGGAAGCTGTTGCTATACTTCCTCAACTAGTACTTTTACAGAGAACTAGAAATATTGACAATTTGACTGGACAGTATGTCTTTCTCCTCGGgtaagatattgtcctttatctaattttaatcattattataaattcctgggttcatgctactacaattgtcctttatctgattttaaacattattataaat...
species | Glycine max |
transcript | GLYMA08G46570.2 |
intron # | 3 |
splice site | 5' |
intron type | U2 |
EST: TGGACAGTATGTCTTTCTCCTCGG TGCATACAGAGGACTATACATTCTCAACTGGATCTATCGCTACTTTAEST: gi|31561500|gb|CD487338.1|CD487338
genomic: TGGACAGTATGTCTTTCTCCTCGGgtaagatatt ... ctcaatgcagTGCATACAGAGGACTATACATTCTCAACTGGATCTATCGCTACTTTA
EST: AGAACTAGAAATATTGACAATTTGACTGGACAGTATGTCTTTCTCCTCGG TGCATACAGAGGACTATACATTCTCAACTGGATCTATCGCTACTTTEST: gi|10232336|gb|BE801224.1|BE801224
genomic: AGAACTAGAAATATTGACAATTTGACTGGACAGTATGTCTTTCTCCTCGGgtaagatatt ... ctcaatgcagTGCATACAGAGGACTATACATTCTCAACTGGATCTATCGCTACTTT
EST: AGAACTACAAATATTGACAATTTGACTGGACAGTATGTCTTTCTTCTCGG TGCGTACAGAGGACTATACATTCTTCAA-TGCATCTATCGCTACTTTACTGEST: gi|209715072|gb|BW677115.1|BW677115
genomic: AGAACTAGAAATATTGACAATTTGACTGGACAGTATGTCTTTCTCCTCGGgtaagatatt ... ctcaatgcagTGCATACAGAGGACTATACATTCT-CAACTGGATCTATCGCTACTTTACTG
EST: AGAACTAGAAATATTGACAATTTGACTGGACAGTATGTCTTTCTCCTCGG TGCATACAGAGGACTATACATTCTCAACTGGATCTATCGCTACTTTACTGAEST: gi|11412647|gb|BF424658.1|BF424658
genomic: AGAACTAGAAATATTGACAATTTGACTGGACAGTATGTCTTTCTCCTCGGgtaagatatt ... ctcaatgcagTGCATACAGAGGACTATACATTCTCAACTGGATCTATCGCTACTTTACTGA
EST: AGAACTAGAAATATTGACAATGTGACTGGACAGTATGTCTTTCTTCTCGG TGCATACAGAGGACTATACATTCTCAACTGGATCTATEST: gi|151401246|gb|EV271060.1|EV271060
genomic: AGAACTAGAAATATTGACAATTTGACTGGACAGTATGTCTTTCTCCTCGGgtaagatatt ... ctcaatgcagTGCATACAGAGGACTATACATTCTCAACTGGATCTAT
EST: AGAACTAGAAATATTGACAATTTGACTGGACAGTATGTCTTTCTCCTCGG TGCATACAGAGGACTATACATTCTCAACTGGATCTATCGCTACTTTACTGA
genomic: AGAACTAGAAATATTGACAATTTGACTGGACAGTATGTCTTTCTCCTCGGgtaagatatt ... ctcaatgcagTGCATACAGAGGACTATACATTCTCAACTGGATCTATCGCTACTTTACTGA
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| CCCTGTATTTGGAAGCTGTTGCTATACTTCCTCAACTAGTACTTTTACAGAGAACTAGAAATATTGACAATTTGACTGGACAGTATGTCTTTCTCCTCGGgtaagatattgtcctttatctaattttaatcattattataaattcctgggttcatgctactacaattgtcctttatctgattttaaacattattataaat
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - CTCCTC