1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' |
GCACTCTCTCATTATCCCAAAATCTCATTTCCCTTCACTGGATGCCACTCCTCCATCAgtaagtaattttcaatagttacaagaagattgaatttattattttgtaacttctttactgattttacactataattttaagtcgatagtaaattctttct...
species | Glycine max |
transcript | GLYMA08G45960.1 |
intron # | 3 |
splice site | 5' |
intron type | U2 |
EST: TTCCCTTCACTGGA-GCCACTCCTCCATCA GTGGTAGCTGCAATGTGTTCAAAAGTGCCCTTCATTAGCAATGCAATCATGEST: gi|254331676|gb|GR846093.1|GR846093
genomic: TTCCCTTCACTGGATGCCACTCCTCCATCAgtaagtaatt ... tatgatacagGTGGTAGCTGCAATGTGTTCAAAAGTGCCCTTCATTAGCAATGCAATCATG
EST: TCAATATCCCAAAATCTCATTTCCCTTCACTGGATGCCACTCCTCCATCA GTGGTAGCTGCAAATGTGTTCAAAAGTGCCCTTCATTAGCAATGCAATCATEST: gi|120530846|gb|EH258979.1|EH258979
genomic: TCATTATCCCAAAATCTCATTTCCCTTCACTGGATGCCACTCCTCCATCAgtaagtaatt ... tatgatacagGTGGTAGCTGC-AATGTGTTCAAAAGTGCCCTTCATTAGCAATGCAATCAT
EST: TCATTATCCCAAAATCTCATTTCCCTTCACTGGATGCCACTCCTCCATCA GTGGTAGCTGCAATGTGTTCAAAAGTGCCCTTCATTAGCAATGCAATCATGEST: gi|254331675|gb|GR846092.1|GR846092
genomic: TCATTATCCCAAAATCTCATTTCCCTTCACTGGATGCCACTCCTCCATCAgtaagtaatt ... tatgatacagGTGGTAGCTGCAATGTGTTCAAAAGTGCCCTTCATTAGCAATGCAATCATG
EST: TCATTATCCCAAAATCTCATTTCCCTTCACTGGATGCCACTCCTCCATCA GTGGTAGCTGCAATGTGTTCAAAAGTGCCCTTCATTAGCAATGCAATCATGEST: gi|26047413|gb|CA784215.1|CA784215
genomic: TCATTATCCCAAAATCTCATTTCCCTTCACTGGATGCCACTCCTCCATCAgtaagtaatt ... tatgatacagGTGGTAGCTGCAATGTGTTCAAAAGTGCCCTTCATTAGCAATGCAATCATG
EST: TCATTATCCCAAAATCTCATTTCCCTTCACTGGATGCCACTCCTCCATCA GTGGTAGCTGCAATGTGTTCAAAAGTGCCCTTCATTAGCAATGCAATCATG
genomic: TCATTATCCCAAAATCTCATTTCCCTTCACTGGATGCCACTCCTCCATCAgtaagtaatt ... tatgatacagGTGGTAGCTGCAATGTGTTCAAAAGTGCCCTTCATTAGCAATGCAATCATG
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| GCACTCTCTCATTATCCCAAAATCTCATTTCCCTTCACTGGATGCCACTCCTCCATCAgtaagtaattttcaatagttacaagaagattgaatttattattttgtaacttctttactgattttacactataattttaagtcgatagtaaattctttct
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