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Data associated with selected splice site

Sequence

 atgc   intronic sequence     ATGC   exonic sequence

TGGTAATGTTAATGAGGGAGCAGGGTCGTTCAATGAACTTGTGAAAGAGATGACCTCAAAACAAGACCTTAAGGCTTTTGCTTTCAAGACCAAAGCCATGgtatataaataattcactgcgtttgcttttgctagttattctttgtgatgatgatcttgatgttttatttttctagtgattcctattttgtttcctactg...

Basic information

species Glycine max
transcript GLYMA08G42280.1
intron # 3
splice site 5'
intron type U2

Mapped EST sequences

Showing partial alignments of ESTs and genomic sequences. See full alignments


 ATGC     EST sequence
 ATGC     genomic sequence (exon)
 ATGC     genomic sequence (truncated intron)


EST: gi|7686757|gb|AW757405.1|AW757405
EST:     TGACCTCAAAACAAGACCTTAAGGCTTTTGCTTTCAAGACCAAAGCCATG                         CTATCACAGTTGGAACGCAAGGTACAATTAGCGAGACAACAGGAGTCAGTT
genomic: TGACCTCAAAACAAGACCTTAAGGCTTTTGCTTTCAAGACCAAAGCCATGgtatataaat ... tcatgttcagCTATCACAGTTGGAACGCAAGGTACAATTAGCGAGACAACAGGAGTCAGTT
EST: gi|21887404|gb|BQ740617.1|BQ740617
EST:     TGACCTCAAAACAAGACCTTAAGGCTTTTGCTTTCAAGACCAAAGCCATG                         CTATCACAGTTGGAACGCAAGGTACAATTAGCGAGACAACAGGAGTCAGTT
genomic: TGACCTCAAAACAAGACCTTAAGGCTTTTGCTTTCAAGACCAAAGCCATGgtatataaat ... tcatgttcagCTATCACAGTTGGAACGCAAGGTACAATTAGCGAGACAACAGGAGTCAGTT