1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' |
AGCTTCACATACAGTAATTTCAAGTACCGTTAAGAAACCTATTGGTGCTAAGAAAGCAGTGAAGAGTGGGGGGCTCGGCGCTCGTAAACTCACTAAAAAGgtatgcaaatagttatctttgtttgcagatgcatgctagaagcgcctgttggttgttggtttttcattatcttgttcactattttcatttgatgactaattatcctaatgaaatgcag
species | Glycine max |
transcript | GLYMA08G36700.2 |
intron # | 3 |
splice site | 5' |
intron type | U2 |
EST: GTGAAGAGTGGGGGGCTCGGCGCTCGTAAACTCACTAAAAAG CCAAGTGAGTCTCTCTATGAGCAGAAGCCTGAGGAACCCCCTGCTCCAGTTEST: gi|58017014|gb|CX703756.1|CX703756
genomic: GTGAAGAGTGGGGGGCTCGGCGCTCGTAAACTCACTAAAAAGgtatgcaaat ... tgaaatgcagCCAAGTGAGTCTCTCTATGAGCAGAAGCCTGAGGAACCCCCTGCTCCAGTT
EST: AGAAAGCAGTGAAGAGTGGGGGGCTCGGCGCTCGTAAACTCACTAAAAAG CCAAGTGAGTCTCTCTATGAGCAGAAGCNTGAGGAACCCCCTGCTCCAGTTEST: gi|5509189|gb|AI855747.1|AI855747
genomic: AGAAAGCAGTGAAGAGTGGGGGGCTCGGCGCTCGTAAACTCACTAAAAAGgtatgcaaat ... tgaaatgcagCCAAGTGAGTCTCTCTATGAGCAGAAGCCTGAGGAACCCCCTGCTCCAGTT
EST: AGAAAGCAGTGAAGAGTGGGGGGCTCGGCGCTCGTAAACTCACTAAAAAG CCAAGTGAGTCTCTCTATGAGCAGAAGCCTGAGGAACCCCCTGCTCCAGTTEST: gi|4397086|gb|AI496083.1|AI496083
genomic: AGAAAGCAGTGAAGAGTGGGGGGCTCGGCGCTCGTAAACTCACTAAAAAGgtatgcaaat ... tgaaatgcagCCAAGTGAGTCTCTCTATGAGCAGAAGCCTGAGGAACCCCCTGCTCCAGTT
EST: AGAAAGCAGTGAAGAGTGGGGGGCTCGGCGCTCGTAAACTCACTAAAAAG CCAAGTGAGTCTCTCTATGAGCAGAAGCCTGAGGAACCCCCTGCTCCAGTTEST: gi|57575109|gb|CX548084.1|CX548084
genomic: AGAAAGCAGTGAAGAGTGGGGGGCTCGGCGCTCGTAAACTCACTAAAAAGgtatgcaaat ... tgaaatgcagCCAAGTGAGTCTCTCTATGAGCAGAAGCCTGAGGAACCCCCTGCTCCAGTT
EST: AGAAAGCAGTGAAGAGTGGGGGGCTCGGCGCTCGTAAACTCACTAAAAAG CCAAGTGAGTCTCTCTATGAGCAGAAGCNTGAGGAACCCCCTGCTCCAGTTEST: gi|22524808|gb|BU083619.1|BU083619
genomic: AGAAAGCAGTGAAGAGTGGGGGGCTCGGCGCTCGTAAACTCACTAAAAAGgtatgcaaat ... tgaaatgcagCCAAGTGAGTCTCTCTATGAGCAGAAGCCTGAGGAACCCCCTGCTCCAGTT
EST: AGAAAGCAGTGAAGAGTGGGGGGCTCGGCGCTCGTAAACTCACTAAAAAG CCAAGTGAGTCTCTCTATGAGCAGAAGCCTGAGGAACCCCCTGCTCCAGTTEST: gi|208296934|gb|GE095326.1|GE095326
genomic: AGAAAGCAGTGAAGAGTGGGGGGCTCGGCGCTCGTAAACTCACTAAAAAGgtatgcaaat ... tgaaatgcagCCAAGTGAGTCTCTCTATGAGCAGAAGCCTGAGGAACCCCCTGCTCCAGTT
EST: AGAAAGCAGTGAAGAGTGGGGGGCTCGGCGCTCGTAAACTCACTAAAAAG CCAAGTGAGTCTCTCTATGAGCAGAAGCCTGAGGAACCCCCTGCTCCAGTTEST: gi|207684066|gb|GD666937.1|GD666937
genomic: AGAAAGCAGTGAAGAGTGGGGGGCTCGGCGCTCGTAAACTCACTAAAAAGgtatgcaaat ... tgaaatgcagCCAAGTGAGTCTCTCTATGAGCAGAAGCCTGAGGAACCCCCTGCTCCAGTT
EST: AGAAAGCAGTGAAGAGTGGGGGGCTCGGCGCTCGTAAACTCACTAAAAAG CCAAGTGAGTCTCTCTATGAGCAGAAGCCTGAGGAACCCCCTGCTCCAGTTEST: gi|58015077|gb|CX701819.1|CX701819
genomic: AGAAAGCAGTGAAGAGTGGGGGGCTCGGCGCTCGTAAACTCACTAAAAAGgtatgcaaat ... tgaaatgcagCCAAGTGAGTCTCTCTATGAGCAGAAGCCTGAGGAACCCCCTGCTCCAGTT
EST: AGAAAGCAGTGAAGAGTGGGGGGCTCGGCGCTCGTAAACTCACTAAAAAG CCAAGTGAGTCTCTCTATGAGCAGAAGCCTGAGGAACCCCCTGCTCCAGTTEST: gi|15813255|gb|BI785530.1|BI785530
genomic: AGAAAGCAGTGAAGAGTGGGGGGCTCGGCGCTCGTAAACTCACTAAAAAGgtatgcaaat ... tgaaatgcagCCAAGTGAGTCTCTCTATGAGCAGAAGCCTGAGGAACCCCCTGCTCCAGTT
EST: AGAAAGCAGTGAAGAGTGGGGGGCTCGGCGCTCGTAAACTCACTAAAAAG CCAAGTGAGTCTCTCTATGAGCAGAATTTTGAGGAACCCCCTGCTCCAGTT
genomic: AGAAAGCAGTGAAGAGTGGGGGGCTCGGCGCTCGTAAACTCACTAAAAAGgtatgcaaat ... tgaaatgcagCCAAGTGAGTCTCTCTATGAGCAGAAGCCTGAGGAACCCCCTGCTCCAGTT
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| AGCTTCACATACAGTAATTTCAAGTACCGTTAAGAAACCTATTGGTGCTAAGAAAGCAGTGAAGAGTGGGGGGCTCGGCGCTCGTAAACTCACTAAAAAGgtatgcaaatagttatctttgtttgcagatgcatgctagaagcgcctgttggttgttggtttttcattatcttgttcactattttcatttgatgactaattatcctaatgaaatgcag
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