1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' | 7 5' 3' | 8 5' 3' | 9 5' 3' |
CATTCCAACTCCCGTAGTTATAATTGACCAAGACTCTGATCCTGATGCTACCGTGGTGGAGATAACTTTTGGTGATCGGCTTGGAGCACTTCTTGACACAgtaagccattcttcgagtaaatctatgattgtgtcacttatctaatgcttttcttttttacttttgatatatgcttattgtcaatacagaatttttgggg...
species | Glycine max |
transcript | GLYMA08G23440.1 |
intron # | 3 |
splice site | 5' |
intron type | U2 |
EST: CCGTGGTGGAGATAACTTTTGGTGATCGGCTTGGAGCACTTCTTGACACA ATGAATGCATTAAAAAACTTAGGTCTCAATGTTGTTAAGGCAAATGTCTTTEST: gi|192298594|gb|FG988535.1|FG988535
genomic: CCGTGGTGGAGATAACTTTTGGTGATCGGCTTGGAGCACTTCTTGACACAgtaagccatt ... tgggttgcagATGAATGCATTAAAAAACTTAGGTCTCAATGTTGTTAAGGCAAATGTCTTT
EST: CCGTGGTGGAGATAACTTTTGGTGATCGGCTTGGAGCACTTCTTGACACA ATGAATGCATTAAAAAACTTAGGTCTCAATGTTGTTAAGGCAAATGTCTTTEST: gi|213590366|gb|DB963887.1|DB963887
genomic: CCGTGGTGGAGATAACTTTTGGTGATCGGCTTGGAGCACTTCTTGACACAgtaagccatt ... tgggttgcagATGAATGCATTAAAAAACTTAGGTCTCAATGTTGTTAAGGCAAATGTCTTT
EST: CCGTGGTGGAGATAACTTTTGGTGATCGGCTTGGAGCACTTCTTGACACA ATGAATGCATTAAAAAACTTAGGTCTCAATGTTGTTAAGGCAAATGTCTTTEST: gi|192326608|gb|FK017295.1|FK017295
genomic: CCGTGGTGGAGATAACTTTTGGTGATCGGCTTGGAGCACTTCTTGACACAgtaagccatt ... tgggttgcagATGAATGCATTAAAAAACTTAGGTCTCAATGTTGTTAAGGCAAATGTCTTT
EST: CCGTGGTGGAGATAACTTTTGGTGATCGGCTTGGAGCACTTCTTGACACA ATGAATGCATTAAAAAACTTAGGTCTCAATGTTGTTAAGGCAAATGTCTTTEST: gi|151405909|gb|EV275724.1|EV275724
genomic: CCGTGGTGGAGATAACTTTTGGTGATCGGCTTGGAGCACTTCTTGACACAgtaagccatt ... tgggttgcagATGAATGCATTAAAAAACTTAGGTCTCAATGTTGTTAAGGCAAATGTCTTT
EST: CCGTGGTGGAGATAACTTTTGGTGATCGGCTTGGAGCACTTCTTGACACA ATGAATGCATTAAAAAACTTAGGTCTCAATGTTGTTAAGGCAAATGTCTTT
genomic: CCGTGGTGGAGATAACTTTTGGTGATCGGCTTGGAGCACTTCTTGACACAgtaagccatt ... tgggttgcagATGAATGCATTAAAAAACTTAGGTCTCAATGTTGTTAAGGCAAATGTCTTT
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| CATTCCAACTCCCGTAGTTATAATTGACCAAGACTCTGATCCTGATGCTACCGTGGTGGAGATAACTTTTGGTGATCGGCTTGGAGCACTTCTTGACACAgtaagccattcttcgagtaaatctatgattgtgtcacttatctaatgcttttcttttttacttttgatatatgcttattgtcaatacagaatttttgggg
- - - - - - - - - - - - - - - - - - - - - - - - - - TGGTGG
- - - - - - - - - - - - - - - - - - - - - - - - - - - GGTGGA
- - - - - - - - - - - - - - - - - - - - - - - - - - - GTGGAG
- - - - - - - - - - - - - - - - - - - - - - - - - - - - TGGAGA
- - - - - - - - - - - - - - - - - - - - - - - - - - - - GGAGAT
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - TTGGAG
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - GGAGCA