1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' | 7 5' 3' | 8 5' 3' | 9 5' 3' |
GACACTGCACAAAGGTGCCCAGGAATGTAAACATGGAGAAACTGCAACATGGTTATTTATTTCCTGAGgtgcttttccacaattttccgttttcatcatgattattgttcacctgaattaatcttgctatattttcgtccaaatactggtttcaaatttatttttacc...
species | Glycine max |
transcript | GLYMA08G19250.1 |
intron # | 3 |
splice site | 5' |
intron type | U2 |
EST: CCAGGAATGTAAACATGGAGAAACTGCAACATGGTTATTTATTTCCTGAG ATTGAAAGACACGAGCTTATACACTTAGAGATGTATCCACATGCAAATGTAEST: gi|192304985|gb|FG996117.1|FG996117
genomic: CCAGGAATGTAAACATGGAGAAACTGCAACATGGTTATTTATTTCCTGAGgtgcttttcc ... attgtatcagATTGAAAGACACGAGCTTATGCACTTAGAGATGTATCCACATGCAAATGTA
EST: CCAGGAATGTAAACATGGAGAAACTGCAACATGGTTATTTATTTCCTGAG ATTGAAAGACACGAGCTTATGCACTTAGAGATGTATCCACATGCAAATGTAEST: gi|151393925|gb|EV263796.1|EV263796
genomic: CCAGGAATGTAAACATGGAGAAACTGCAACATGGTTATTTATTTCCTGAGgtgcttttcc ... attgtatcagATTGAAAGACACGAGCTTATGCACTTAGAGATGTATCCACATGCAAATGTA
EST: CCAGGAATGTAAACATGGAGAAACTGCAACATGGTTATTTATTTCCTGAG ATTGAAAGACACGAGCTTATGCACTTAGAGATGTATCCACATGCAAATGTA
genomic: CCAGGAATGTAAACATGGAGAAACTGCAACATGGTTATTTATTTCCTGAGgtgcttttcc ... attgtatcagATTGAAAGACACGAGCTTATGCACTTAGAGATGTATCCACATGCAAATGTA
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| GACACTGCACAAAGGTGCCCAGGAATGTAAACATGGAGAAACTGCAACATGGTTATTTATTTCCTGAGgtgcttttccacaattttccgttttcatcatgattattgttcacctgaattaatcttgctatattttcgtccaaatactggtttcaaatttatttttacc
- - - - - - - - - - - - - - - CATGGA
- - - - - - - - - - - - - - - - TGGAGA
- - - - - - - - - - - - - - - - - GGAGAA