1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' |
TCGAGAAAAGGGGTGGCCGAACAGATGACTATTGATCATGAGCCCAATACTGAGAGGGGCATCATTGAGAACAAAGGCGGCTTTGTCTCAAACATGCCAGgttctttaataaaccttaatgagttaatatctgtgagatatcgcttaaattatttccctctatagatagcaaaatgagtggcatgaaatgacttataata...
species | Glycine max |
transcript | GLYMA08G19090.1 |
intron # | 3 |
splice site | 5' |
intron type | U2 |
EST: TGAGAGGGGCATCATTGAGAACAAAGGCGGCTTTGTCTCAAACATGCCAG GAGACGTTGCAAGAGTAAATGGGCAGCTTGCAGTTTCTCGAGCATTTGGAGEST: gi|151413098|gb|EV282906.1|EV282906
genomic: TGAGAGGGGCATCATTGAGAACAAAGGCGGCTTTGTCTCAAACATGCCAGgttctttaat ... gttatttcagGAGACGTTGCAAGAGTAAATGGGCAGCTTGCAGTTTCTCGAGCATTTGGAG
EST: TGAGAGGGGCATCATTGAGAACAAAGGCGGCTTTGTCTCAAACATGCCAG GAGACGTTGCAAGAGTAAATGGGCAGCTTGCAGTTTCTCGAGCATTTGGAG
genomic: TGAGAGGGGCATCATTGAGAACAAAGGCGGCTTTGTCTCAAACATGCCAGgttctttaat ... gttatttcagGAGACGTTGCAAGAGTAAATGGGCAGCTTGCAGTTTCTCGAGCATTTGGAG
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| TCGAGAAAAGGGGTGGCCGAACAGATGACTATTGATCATGAGCCCAATACTGAGAGGGGCATCATTGAGAACAAAGGCGGCTTTGTCTCAAACATGCCAGgttctttaataaaccttaatgagttaatatctgtgagatatcgcttaaattatttccctctatagatagcaaaatgagtggcatgaaatgacttataata
- - - - - - - - - - - - - - - - - - - - - - - - - GAGAGG
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -ttccctc