1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' | 7 5' 3' | 8 5' 3' | 9 5' 3' |
GTTACTGAGGAGCGGCTTGCTGCCTTATTCAGCAGCTGTGGACAAgtaagttatgagccttgattgatagcttgattactctttcttagtttacaattaggtgcaaatattacataggttaataaatttaaagtagggtatttgt...
species | Glycine max |
transcript | GLYMA08G18810.1 |
intron # | 3 |
splice site | 5' |
intron type | U2 |
EST: GTTACTGAGGAGCGGCTTGCTGCCTTATTCAGCAGCTGTGGACAA GTAATTGATTGCCGAATTTGTGGTGATCCACATTCAGTTCTCCGTTTTGCTEST: gi|19934604|gb|BQ079634.1|BQ079634
genomic: GTTACTGAGGAGCGGCTTGCTGCCTTATTCAGCAGCTGTGGACAAgtaagttatg ... tgaattgaagGTAATTGATTGCCGAATTTGTGGTGATCCACATTCAGTTCTCCGTTTTGCT
EST: GTTACTGAGGAGCGGCTTGCTGCCTTATTCAGCAGCTGTGGACAA GTAATTGATTGCCGAATTTGTGGTGATCCACATTCAGTTCTCCGTTTTGCT
genomic: GTTACTGAGGAGCGGCTTGCTGCCTTATTCAGCAGCTGTGGACAAgtaagttatg ... tgaattgaagGTAATTGATTGCCGAATTTGTGGTGATCCACATTCAGTTCTCCGTTTTGCT
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| GTTACTGAGGAGCGGCTTGCTGCCTTATTCAGCAGCTGTGGACAAgtaagttatgagccttgattgatagcttgattactctttcttagtttacaattaggtgcaaatattacataggttaataaatttaaagtagggtatttgt
- - - GAGGAG
- - - - - - - - TGCTGC
- - - - - - - - - - - - - - - GCAGCT
- - - - - - - - - - - - - - - - CAGCTG