1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' |
TGGAGAGCCTATGCATGCTGAGAGTGGATACTGGCGTCCTAAACCTGATGGCACTATTGAAGTTGTGATTGCTCAAAGCAATGGTCTTGTGGAAGTTCAGgtactatttgccaatttgatttggttttgtgtcatggatacactgtttgaccaattggcttcatgtgtctctataatctttatgctagaggaatggtggg...
species | Glycine max |
transcript | GLYMA08G17020.1 |
intron # | 3 |
splice site | 5' |
intron type | U2 |
EST: GCACTATTGAAGTTGTGATTGCTCAAAGCAATGGTCTTGTGGAAGTTCAG AAAGGAACATACAGCGCTGAAGAGAAAGTGATACAGCTTCAGAGTGAAATAEST: gi|151402018|gb|EV271831.1|EV271831
genomic: GCACTATTGAAGTTGTGATTGCTCAAAGCAATGGTCTTGTGGAAGTTCAGgtactatttg ... gtgccaacagAAAGGAACATACAGCGCTGAAGAGAAAGTGATACAGCTTCAGAGTGAAATA
EST: GCACTATTGAAGTTGTGATTGCTCAAAGCAATGGTCTTGTGGAAGTTCAG AAAGGAACATACAGCGCTGAAGAGAAAGTGATACAGCTTCAGAGTGAAATAEST: gi|192296498|gb|FG989114.1|FG989114
genomic: GCACTATTGAAGTTGTGATTGCTCAAAGCAATGGTCTTGTGGAAGTTCAGgtactatttg ... gtgccaacagAAAGGAACATACAGCGCTGAAGAGAAAGTGATACAGCTTCAGAGTGAAATA
EST: GCACTATTGAAGTTGTGATTGCTCAAAGCAATGGTCTTGTGGAAGTTCAG AAAGGAACATACAGCGCTGAAGAGAAAGTGATACAGCTTCAGAGTGAAATAEST: gi|151409541|gb|EV279349.1|EV279349
genomic: GCACTATTGAAGTTGTGATTGCTCAAAGCAATGGTCTTGTGGAAGTTCAGgtactatttg ... gtgccaacagAAAGGAACATACAGCGCTGAAGAGAAAGTGATACAGCTTCAGAGTGAAATA
EST: GCACTATTGAAGTTGTGATTGCTCAAAGCAATGGTCTTGTGGAAGTTCAG AAAGGAACATACAGCGCTGAAGAGAAAGTGATACAGCTTCAGAGTGAAATAEST: gi|213589307|gb|DB961640.1|DB961640
genomic: GCACTATTGAAGTTGTGATTGCTCAAAGCAATGGTCTTGTGGAAGTTCAGgtactatttg ... gtgccaacagAAAGGAACATACAGCGCTGAAGAGAAAGTGATACAGCTTCAGAGTGAAATA
EST: GCACTATTGAAGTTGTGATTGCTCAAAGCAATGGTCTTGTGGAAGTTCAG AAAGGAACATACAGCGCTGAAGAGAAAGTGATACAGCTTCAGAGTGAAATAEST: gi|298190669|gb|HO032790.1|HO032790
genomic: GCACTATTGAAGTTGTGATTGCTCAAAGCAATGGTCTTGTGGAAGTTCAGgtactatttg ... gtgccaacagAAAGGAACATACAGCGCTGAAGAGAAAGTGATACAGCTTCAGAGTGAAATA
EST: GCACTATTGAAGTTGTGATTGCTCAAAGCAATGGTCTTGTGGAAGTTCAG AAAGGAACATACAGCGCTGAAGAGAAAGTGATACAGCTTCAGAGTGAAATAEST: gi|209706462|gb|BW680749.1|BW680749
genomic: GCACTATTGAAGTTGTGATTGCTCAAAGCAATGGTCTTGTGGAAGTTCAGgtactatttg ... gtgccaacagAAAGGAACATACAGCGCTGAAGAGAAAGTGATACAGCTTCAGAGTGAAATA
EST: GCACTATTGAAGTTGTGATTGCTCAAAGCAATGGTCTTGTGGAAGTTCAG AAAGGAACATACAGCGCTGAAGAGAAAGTGATACAGCTTCAGAGTGAAATA
genomic: GCACTATTGAAGTTGTGATTGCTCAAAGCAATGGTCTTGTGGAAGTTCAGgtactatttg ... gtgccaacagAAAGGAACATACAGCGCTGAAGAGAAAGTGATACAGCTTCAGAGTGAAATA
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| TGGAGAGCCTATGCATGCTGAGAGTGGATACTGGCGTCCTAAACCTGATGGCACTATTGAAGTTGTGATTGCTCAAAGCAATGGTCTTGTGGAAGTTCAGgtactatttgccaatttgatttggttttgtgtcatggatacactgtttgaccaattggcttcatgtgtctctataatctttatgctagaggaatggtggg
- - - - - - - - - - - - - - - - - - - - - - - - - - - - TTGAAG
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - AAGCAA
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - TGGAAG