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Data associated with selected splice site

Sequence

 atgc   intronic sequence     ATGC   exonic sequence

GGCCAACAATCTAATCTGGCGAATTCAGTTAGATGGCTCCAAACTCCGAGCTCCAGTAACACTgtattctcttgctctacccttaacgttggtgtttgatgaaagtgttcagtgaatactattagatgctattttttctctgaggagggtgtttctattactg...

Basic information

species Glycine max
transcript GLYMA08G16770.1
intron # 3
splice site 5'
intron type U2

Mapped EST sequences

Showing partial alignments of ESTs and genomic sequences. See full alignments


 ATGC     EST sequence
 ATGC     genomic sequence (exon)
 ATGC     genomic sequence (truncated intron)


EST: gi|213593279|gb|DB966104.1|DB966104
EST:     ATCTGGCGAATTCAGTTAGATGGCTCCAAACTCCGAGCTCCAGTAACACT                         GATCTTTATTCTGAGTTGAAGGAACTGGTTCCAGAGTATCAG
genomic: ATCTGGCGAATTCAGTTAGATGGCTCCAAACTCCGAGCTCCAGTAACACTgtattctctt ... tgttctgcagGATCTTTATTCTGAGTTGAAGGAACTGGTTCCAGAGTATCAG
EST: gi|14206066|gb|BG839744.1|BG839744
EST:     ATCTGGCGAATTCAGTTAGATGGCTCCAAACTCCGAGCTCCAGTAACACT                         GATCTTTATTCTGAGTTGAAGGAACTGGTTCCAGAGTATCAG
genomic: ATCTGGCGAATTCAGTTAGATGGCTCCAAACTCCGAGCTCCAGTAACACTgtattctctt ... tgttctgcagGATCTTTATTCTGAGTTGAAGGAACTGGTTCCAGAGTATCAG
EST: gi|13562412|gb|BG550632.1|BG550632
EST:     ATCTGGCGAATTCAGTTAGATGGCTCCAAACTCCGAGCTCCAGTAACACT                         GATCTTTATTCTGAGTTGAAGGAACTGGTTCCAGAGTATCAG
genomic: ATCTGGCGAATTCAGTTAGATGGCTCCAAACTCCGAGCTCCAGTAACACTgtattctctt ... tgttctgcagGATCTTTATTCTGAGTTGAAGGAACTGGTTCCAGAGTATCAG
EST: gi|209725513|gb|BW677810.1|BW677810
EST:     ATCTGGCGAATTCAGTTAGATGGCTCCAAACTCCGAGCTCCAGTAACACT                         GATCTTTATTCTGAGTTGAAGGAACTGGTTCCAGAGTATCAG
genomic: ATCTGGCGAATTCAGTTAGATGGCTCCAAACTCCGAGCTCCAGTAACACTgtattctctt ... tgttctgcagGATCTTTATTCTGAGTTGAAGGAACTGGTTCCAGAGTATCAG