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Data associated with selected splice site

Sequence

 atgc   intronic sequence     ATGC   exonic sequence

ACAAAACAGATGACACTTTAGCCGTCGTTTGGAGAGATGAAGGTTTCGATGATTCCGAGGTTAATGGTATGACTCTCAAACAACTCCGGCACCAAGTGATgtaagcttttcaactcactctttcttttcgaccaaagttatgttactcatcatcatcatcatagttgtgctaattcagttcattcaataatttgatgtgc...

Basic information

species Glycine max
transcript GLYMA08G11980.1
intron # 3
splice site 5'
intron type U2

Mapped EST sequences

Showing partial alignments of ESTs and genomic sequences. See full alignments


 ATGC     EST sequence
 ATGC     genomic sequence (exon)
 ATGC     genomic sequence (truncated intron)


EST: gi|4405666|gb|AI507815.1|AI507815
EST:     CGGCACCAAGTGAT                         GTTGGTAGCAAATGCAATAGATGCCACATTCTCGAAAGGAGATGCAATTGC
genomic: CGGCACCAAGTGATgtaagctttt ... ttatttccagGTTGGTAGCAAATGCAATAGATGCCACATTCTCGAAAGGAGATGCAATTGC
EST: gi|120533588|gb|EH261721.1|EH261721
EST:     GATTCCGAGGTTAATGGTATGACTCTCAAACAACTCCGGCACCAAGTGAT                         GTTGGTAGCAAATGCAATAGATGCCACATTCTCGAAAGGAGATGCAATTGC
genomic: GATTCCGAGGTTAATGGTATGACTCTCAAACAACTCCGGCACCAAGTGATgtaagctttt ... ttatttccagGTTGGTAGCAAATGCAATAGATGCCACATTCTCGAAAGGAGATGCAATTGC