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Data associated with selected splice site

Sequence

 atgc   intronic sequence     ATGC   exonic sequence

GAAGTCATGCTGGAGTTCCGTGCTGGCAAAATGTTTCTTGAGGAAAAAAGGGTTGTTCCTGATACACGGAAAGGACTTGTTCGAATTGCTAGGgtatggtttaattgcatgtcgaatacttcattattcattgtgttttaaaccctttactgcaactggatttttaaagtgattgcttctgtttcag

Basic information

species Glycine max
transcript GLYMA08G03080.1
intron # 3
splice site 5'
intron type U2

Mapped EST sequences

Showing partial alignments of ESTs and genomic sequences. See full alignments


 ATGC     EST sequence
 ATGC     genomic sequence (exon)
 ATGC     genomic sequence (truncated intron)


EST: gi|209719590|gb|BW672071.1|BW672071
EST:     AAAAAAGGGTTGTTCCTGATACACGGAAAGGACTTGTTCGAATTGCTAGG                         GGTGAGGAGGGATTAGTCCATTTTCAGTGGCTTGATCGCACACAAAATATT
genomic: AAAAAAGGGTTGTTCCTGATACACGGAAAGGACTTGTTCGAATTGCTAGGgtatggttta ... tctgtttcagGGTGAGGAGGGATTAGTCCATTTTCAGTGGCTTGATCGCACACAAAATATT
EST: gi|254344647|gb|GR851237.1|GR851237
EST:     AAAAAAGGGTTGTTCCTGATACACGGAAAGGACTTGTTCGAATTGCTAGG                         GGTGAGGAGGGATTAGTCCATTTTCAGTGGCTTGATCGCACACAAAATATT
genomic: AAAAAAGGGTTGTTCCTGATACACGGAAAGGACTTGTTCGAATTGCTAGGgtatggttta ... tctgtttcagGGTGAGGAGGGATTAGTCCATTTTCAGTGGCTTGATCGCACACAAAATATT
EST: gi|27446099|gb|CA953222.1|CA953222
EST:     AAAAAAGGGTTGTTCCTGATACACGGAAAGGACTTGTTCGAATTGCTAGG                         GGTGAGGAGGGATTAGTCCATTTTCAGTGGCTTGATCGCACACAAAATATT
genomic: AAAAAAGGGTTGTTCCTGATACACGGAAAGGACTTGTTCGAATTGCTAGGgtatggttta ... tctgtttcagGGTGAGGAGGGATTAGTCCATTTTCAGTGGCTTGATCGCACACAAAATATT
EST: gi|298184120|gb|HO029333.1|HO029333
EST:     AAAAAAGGGTTGTTCCTGATACACGGAAAGGACTTGTTCGAATTGCTAGG                         GGTGAGGAGGGATTAGTCCATTTTCAGTGGCTTGATCGCACACAAAATGTT
genomic: AAAAAAGGGTTGTTCCTGATACACGGAAAGGACTTGTTCGAATTGCTAGGgtatggttta ... tctgtttcagGGTGAGGAGGGATTAGTCCATTTTCAGTGGCTTGATCGCACACAAAATATT
EST: gi|120532595|gb|EH260728.1|EH260728
EST:     AAAAAAGGGTTGTTCCTGATACACGGAAAGGACTTGTTCGAATTGCTAGG                         GGTGAGGAGGGATTAGTCCATTTTCAGTGGCTTGATCGCACACAAAATATT
genomic: AAAAAAGGGTTGTTCCTGATACACGGAAAGGACTTGTTCGAATTGCTAGGgtatggttta ... tctgtttcagGGTGAGGAGGGATTAGTCCATTTTCAGTGGCTTGATCGCACACAAAATATT
EST: gi|27446181|gb|CA953304.1|CA953304
EST:     AAAAAAGGGTTGTTCCTGATACACGGAAAGGACTTGTTCGAATTGCTAGG                         GGTGAGGAGGGATTAGTCCATTTTCAGTGGCTTGATCGCACACAAAATATT
genomic: AAAAAAGGGTTGTTCCTGATACACGGAAAGGACTTGTTCGAATTGCTAGGgtatggttta ... tctgtttcagGGTGAGGAGGGATTAGTCCATTTTCAGTGGCTTGATCGCACACAAAATATT
EST: gi|6072781|gb|AW102168.1|AW102168
EST:     AAAAAAGGGTTGTTCCTGATACACGGAAAGGACTTGTTCGAATTGCTAGG                         GGTGAGGAGGGATTAGTCCATTTTCAGTGGCTTGATCGCACACAAAATATT
genomic: AAAAAAGGGTTGTTCCTGATACACGGAAAGGACTTGTTCGAATTGCTAGGgtatggttta ... tctgtttcagGGTGAGGAGGGATTAGTCCATTTTCAGTGGCTTGATCGCACACAAAATATT