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Data associated with selected splice site

Sequence

 atgc   intronic sequence     ATGC   exonic sequence

CACCTTGACATGCTCTTTCCAAATACTTAAATCTTCTGAAAAGAAAGGGAAATGTGGATTTGGCAACAACACATCAAGACCAGGAACTCCACCACATAAGgtaagaagatggaaattattttaaggcatgcacttgttcattaatgcatattctgtttatgtatgtggatctagtgcttgtatgttttgaagcaatattt...

Basic information

species Glycine max
transcript GLYMA08G02180.1
intron # 3
splice site 5'
intron type U2

Mapped EST sequences

Showing partial alignments of ESTs and genomic sequences. See full alignments


 ATGC     EST sequence
 ATGC     genomic sequence (exon)
 ATGC     genomic sequence (truncated intron)


EST: gi|151402719|gb|EV272532.1|EV272532
EST:     AATGTGGATTTGGCAACAACACATCAAGACCAGGAACTCCACCACATAAG                         GGTGGGAAGAATTAACATTCCCGAGCTATACAAGGTCAGTGAGCTGAATGG
genomic: AATGTGGATTTGGCAACAACACATCAAGACCAGGAACTCCACCACATAAGgtaagaagat ... ttttatccagGGTGGGAAGAATTAACATTCCCGAGCTATACAAGGTCAGTGAGCTGAATGG
EST: gi|193681368|gb|FK624476.1|FK624476
EST:     AATGTGGATTTGGCAACAACACATCAAGACCAGGAACTCCACCACATAAG                         GGTGGGAAGAATTAACATTCCCGAG
genomic: AATGTGGATTTGGCAACAACACATCAAGACCAGGAACTCCACCACATAAGgtaagaagat ... ttttatccagGGTGGGAAGAATTAACATTCCCGAG