1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' | 7 5' 3' | 8 5' 3' | 9 5' 3' |
GGATAGACTTAGCATTAGTCGTGAGAAGTATAGACAAACTAGACTAGAGCAGTACAAGAACTATGAAAATATACCTCATTCAGGCGAACGGTCAGAAAAGgtacaatgtgttttacttgatttctgtagcttttgagtaatgatttttgcagggatttttctctcatctactctatttgttgtctacag
species | Glycine max |
transcript | GLYMA07G40060.1 |
intron # | 3 |
splice site | 5' |
intron type | U2 |
EST: AGTACAAGAACTATGAAAATATACCTCATTCAGGCGAACGGTCAGAAAAG GAATGCACACCAACACATAGAGGAGGGAAGTATTATGATTTCTGGCAAAACEST: gi|192324872|gb|FK015368.1|FK015368
genomic: AGTACAAGAACTATGAAAATATACCTCATTCAGGCGAACGGTCAGAAAAGgtacaatgtg ... ttgtctacagGAATGCACACCAACACATAGAGGAGGGAAGTATTATGATTTCTGGCAAAAC
EST: AGTACAAGAACTATGAAAATATACCTCATTCAGGCGAACGGTCAGAAAAG GAATGCACACCAACACATAGAGGAGGGAAGTATTATGATTTCTGGCAAAACEST: gi|19345980|gb|BM890860.1|BM890860
genomic: AGTACAAGAACTATGAAAATATACCTCATTCAGGCGAACGGTCAGAAAAGgtacaatgtg ... ttgtctacagGAATGCACACCAACACATAGAGGAGGGAAGTATTATGATTTCTGGCAAAAC
EST: AGTACAAGAACTATGAAAATATACCTCATTCAGGCGAACGGTCAGAAAAG GAATGCACACCAACACATAGAGGAGGGAAGTATTATGATTTCTGGCAAAAC
genomic: AGTACAAGAACTATGAAAATATACCTCATTCAGGCGAACGGTCAGAAAAGgtacaatgtg ... ttgtctacagGAATGCACACCAACACATAGAGGAGGGAAGTATTATGATTTCTGGCAAAAC
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| GGATAGACTTAGCATTAGTCGTGAGAAGTATAGACAAACTAGACTAGAGCAGTACAAGAACTATGAAAATATACCTCATTCAGGCGAACGGTCAGAAAAGgtacaatgtgttttacttgatttctgtagcttttgagtaatgatttttgcagggatttttctctcatctactctatttgttgtctacag
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