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CGCTGCACAGCTGATTCCCAGGTTCTACAAGTTCTTTCCTGACCTTTCTAGCCCTGCTCTCGATGCACATCTTGATTTGGTTGAGGCTGAAGAACTCGGGgtgtgtattttgctcctctaattacatctaatataatatgcgtatgatataatttgtgattctgtatgtgtgtgtgtgtggcggtggctgaggaatggtg...
species | Glycine max |
transcript | GLYMA07G32480.1 |
intron # | 3 |
splice site | 5' |
intron type | U2 |
EST: GCCCTGCTCTCGATGCACATCTTGATTTGGTTGAGGCTGAAGAACTCGGG GTTCGAGTGCAAGCAATTAGAGGTCTGCCTCTTTTTTGTAAGGATACACCTEST: gi|213617036|gb|DB961516.1|DB961516
genomic: GCCCTGCTCTCGATGCACATCTTGATTTGGTTGAGGCTGAAGAACTCGGGgtgtgtattt ... tgctgtacagGTTCGAGTGCAAGCAATTAGAGGTCTGCCTCTTTTTTGTAAGGATACACCT
EST: GCCCTGCTCTCGATGCACATCTTGATTTGGTTGAGGCTGAAGAACTCGGG GTTCGAGTGCAAGCAATTAGAGGTCTGCCTCTTTTTTGTAAGGATACACCTEST: gi|209719847|gb|BW674999.1|BW674999
genomic: GCCCTGCTCTCGATGCACATCTTGATTTGGTTGAGGCTGAAGAACTCGGGgtgtgtattt ... tgctgtacagGTTCGAGTGCAAGCAATTAGAGGTCTGCCTCTTTTTTGTAAGGATACACCT
EST: GCCCTGCTCTCGATGCACATCTTGATTTGGTTGAGGCTGAAGAACTCGGG GTTCGAGTGCAAGCAATTAGAGGTCTTCCTCTTTTTTGTAAGGATACACCTEST: gi|213590208|gb|DB963813.1|DB963813
genomic: GCCCTGCTCTCGATGCACATCTTGATTTGGTTGAGGCTGAAGAACTCGGGgtgtgtattt ... tgctgtacagGTTCGAGTGCAAGCAATTAGAGGTCTGCCTCTTTTTTGTAAGGATACACCT
EST: GCCCTGCTCTCGATGCACATCTTGATTTGGTTGAGGCTGAAGAACTCGGG GTTCGAGTGCAAGCAATTAGAGGTCTGCCTCTTTTTTGTAAGGATACACCTEST: gi|23057710|gb|BU578259.1|BU578259
genomic: GCCCTGCTCTCGATGCACATCTTGATTTGGTTGAGGCTGAAGAACTCGGGgtgtgtattt ... tgctgtacagGTTCGAGTGCAAGCAATTAGAGGTCTGCCTCTTTTTTGTAAGGATACACCT
EST: GCCCTGCTCTCGATGCACATCTTGATTTGGTTGAGGCTGAAGAACTCGGG GTTCGAGTGCAAGCAATTAGAGGTCTGCCTCTTTTTTGTAAGGATACACCTEST: gi|6566471|gb|AW234116.1|AW234116
genomic: GCCCTGCTCTCGATGCACATCTTGATTTGGTTGAGGCTGAAGAACTCGGGgtgtgtattt ... tgctgtacagGTTCGAGTGCAAGCAATTAGAGGTCTGCCTCTTTTTTGTAAGGATACACCT
EST: GCCCTGCTCTCGATGCACATCTTGATTTGGTTGAGGCTGAAGAACTCGGG GTTCGAGTGCAAGCAATTAGAGGTCTGCCTCTTTTTTGTAAGGATACACCTEST: gi|298193123|gb|HO033557.1|HO033557
genomic: GCCCTGCTCTCGATGCACATCTTGATTTGGTTGAGGCTGAAGAACTCGGGgtgtgtattt ... tgctgtacagGTTCGAGTGCAAGCAATTAGAGGTCTGCCTCTTTTTTGTAAGGATACACCT
EST: GCCCTGCTCTCGATGCACATCTTGATTTGGTTGAGGCTGAAGAACTCGGG GTTCGAGTGCAAGCAATTAGAGGTCTGCCTCTTTTTTGTAAGGATACACCT
genomic: GCCCTGCTCTCGATGCACATCTTGATTTGGTTGAGGCTGAAGAACTCGGGgtgtgtattt ... tgctgtacagGTTCGAGTGCAAGCAATTAGAGGTCTGCCTCTTTTTTGTAAGGATACACCT
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| CGCTGCACAGCTGATTCCCAGGTTCTACAAGTTCTTTCCTGACCTTTCTAGCCCTGCTCTCGATGCACATCTTGATTTGGTTGAGGCTGAAGAACTCGGGgtgtgtattttgctcctctaattacatctaatataatatgcgtatgatataatttgtgattctgtatgtgtgtgtgtgtggcggtggctgaggaatggtg
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - CTGAAG
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - TGAAGA
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - AAGAAC
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -gtggcgg