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Data associated with selected splice site

Sequence

 atgc   intronic sequence     ATGC   exonic sequence

GCAATATTTTGTGCATGTTGATGACAGCGTTCCTCAAAAGgttggttttttggtagcttttttaaatgtcaattttaattggttatttatgaattgatttttaagtaattagggatgggtttgatggtacttcttcatta...

Basic information

species Glycine max
transcript GLYMA07G15170.1
intron # 3
splice site 5'
intron type U2

Mapped EST sequences

Showing partial alignments of ESTs and genomic sequences. See full alignments


 ATGC     EST sequence
 ATGC     genomic sequence (exon)
 ATGC     genomic sequence (truncated intron)


EST: gi|208332905|gb|GE131466.1|GE131466
EST:     GCAATATTTTGTGCATGTTGATGACAGCGTTCCTCAAAAG                         GTCGTTGTTCACAAAG
genomic: GCAATATTTTGTGCATGTTGATGACAGCGTTCCTCAAAAGgttggttttt ... cttatgacagGTCGTTGTTCACAAAG
EST: gi|213598739|gb|DB956636.1|DB956636
EST:     GCAATATTTTGTGCATGTTGATGACAGCGTTCCTCANAAG                         GTCGTTGTTCACAAAGATGGTGCAAGAGGGGTACATTTTAGGCGTGCCGGG
genomic: GCAATATTTTGTGCATGTTGATGACAGCGTTCCTCAAAAGgttggttttt ... cttatgacagGTCGTTGTTCACAAAGATGGTGCAAGAGGGGTACATTTTAGGCGTGCCGGG
EST: gi|17023871|gb|BM094905.1|BM094905
EST:     GCAATATTTTGTGCATGTTGATGACAGCGTTCCTCAAAAG                         GTCGTTGTTCACAAAGATGGTGCAAGAGGGGTACATTTTAGGCGTGCCGGG
genomic: GCAATATTTTGTGCATGTTGATGACAGCGTTCCTCAAAAGgttggttttt ... cttatgacagGTCGTTGTTCACAAAGATGGTGCAAGAGGGGTACATTTTAGGCGTGCCGGG
EST: gi|151398093|gb|EV267971.1|EV267971
EST:     GCAATATTTTGTGCATGTTGATGACAGCGTTCCTCAAAAG                         GTCGTTGTTCACAAAGATGGAGCAAGAGGGGTACATTTTAGGCGTGCCGGG
genomic: GCAATATTTTGTGCATGTTGATGACAGCGTTCCTCAAAAGgttggttttt ... cttatgacagGTCGTTGTTCACAAAGATGGTGCAAGAGGGGTACATTTTAGGCGTGCCGGG
EST: gi|151396687|gb|EV266560.1|EV266560
EST:     GCAATATTTTGTGCATGTTGATGACAGCGTTCCTCAAAAG                         GTCGTTGTTCACAAAGATGGTGCAAGAGGGGTACATTTTAGGCGTGCCGGG
genomic: GCAATATTTTGTGCATGTTGATGACAGCGTTCCTCAAAAGgttggttttt ... cttatgacagGTCGTTGTTCACAAAGATGGTGCAAGAGGGGTACATTTTAGGCGTGCCGGG
EST: gi|209711853|gb|BW674115.1|BW674115
EST:     GCAATATTTTGTGCATGTTGATGACAGCGTTCCTCANAAG                         GTCGTTGTTCACAAAGATGGTGCAAGAGGGGTACATTTTAGGCGTGCCGGG
genomic: GCAATATTTTGTGCATGTTGATGACAGCGTTCCTCAAAAGgttggttttt ... cttatgacagGTCGTTGTTCACAAAGATGGTGCAAGAGGGGTACATTTTAGGCGTGCCGGG