1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' | 7 5' 3' | 8 5' 3' | 9 5' 3' | 10 5' 3' | 11 5' 3' |
TCGGCTACTTGCTGTTGAGGGTTGTGCAGCTCTGGGAAAATTGTTGGAACCTCAAGATTGTGTGGCACATATTCTTCCTGTCATAGTCAATTTTTCTCAGgtttgttggccattagtaatacactgatactatatatgtagagattagagatatatcctccatatccattttgtggccaacactaatgaggggatgtctt...
species | Glycine max |
transcript | GLYMA07G10000.1 |
intron # | 3 |
splice site | 5' |
intron type | U2 |
EST: CTCAAGATTGCGTGGCACATATTCTTCCTGTCATAGTCAATTTTTCTCAG GATAAGTCATGGCGTGTTCGTTACATGGTTGCTAATCAACTATATGAGCTAEST: gi|208323465|gb|GE119572.1|GE119572
genomic: CTCAAGATTGTGTGGCACATATTCTTCCTGTCATAGTCAATTTTTCTCAGgtttgttggc ... tcttatccagGATAAGTCATGGCGTGTTCGTTACATGGTTGCTAATCAACTATATGAGCTA
EST: CTCAAGATTGTGTGGCACATATTCTTCCTGTCATAGTCAATTTTTCTCAG GATAAGTCATGGCGTGTTCGTTACATGGTTGCTAATCAACTATATGAGCTAEST: gi|208239870|gb|GE038172.1|GE038172
genomic: CTCAAGATTGTGTGGCACATATTCTTCCTGTCATAGTCAATTTTTCTCAGgtttgttggc ... tcttatccagGATAAGTCATGGCGTGTTCGTTACATGGTTGCTAATCAACTATATGAGCTA
EST: TAGTCAATTTTTCTCAG GATAAGTCATGGCGTGTTCGTTACATGGTTGCTAATCAACTATATGAGCTAEST: gi|193585901|gb|FK541623.1|FK541623
genomic: TAGTCAATTTTTCTCAGgtttgttggc ... tcttatccagGATAAGTCATGGCGTGTTCGTTACATGGTTGCTAATCAACTATATGAGCTA
EST: CAATTTTTCTCAG GATAAGTCATGGCGTGTTCGTTACATGGTTGCTAATCAACTATATGAGCTAEST: gi|193337883|gb|FK305022.1|FK305022
genomic: CAATTTTTCTCAGgtttgttggc ... tcttatccagGATAAGTCATGGCGTGTTCGTTACATGGTTGCTAATCAACTATATGAGCTA
EST: CTCAAGATCGTGTGGCACATATTCTTCCTGTCATAGTCAATTTTTCTCAG GATAAGTCATGGCGTGTTCGTTACATGGTTGCTAATCAACTATATGAGCTAEST: gi|208212058|gb|GE008737.1|GE008737
genomic: CTCAAGATTGTGTGGCACATATTCTTCCTGTCATAGTCAATTTTTCTCAGgtttgttggc ... tcttatccagGATAAGTCATGGCGTGTTCGTTACATGGTTGCTAATCAACTATATGAGCTA
EST: CTCAAGATTGTGTGGCACATATTCTTCCTGTCATAGTCAATTTTTCTCAG GATAAGTCATGGCGTAGTTCGTTACATGEST: gi|208256618|gb|GE054843.1|GE054843
genomic: CTCAAGATTGTGTGGCACATATTCTTCCTGTCATAGTCAATTTTTCTCAGgtttgttggc ... tcttatccagGATAAGTCATGGCGT-GTTCGTTACATG
EST: CTCAAGATTGTGTGGCACATATTCTTCCTGTCATAGTCAATTTTTCTCAG GATAAGTCATGGCGTGTTCGTTACATGGTTGCTAATCAACTATATGAGCTA
genomic: CTCAAGATTGTGTGGCACATATTCTTCCTGTCATAGTCAATTTTTCTCAGgtttgttggc ... tcttatccagGATAAGTCATGGCGTGTTCGTTACATGGTTGCTAATCAACTATATGAGCTA
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| TCGGCTACTTGCTGTTGAGGGTTGTGCAGCTCTGGGAAAATTGTTGGAACCTCAAGATTGTGTGGCACATATTCTTCCTGTCATAGTCAATTTTTCTCAGgtttgttggccattagtaatacactgatactatatatgtagagattagagatatatcctccatatccattttgtggccaacactaatgaggggatgtctt
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -ggggatg