1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' | 7 5' 3' |
GTTAGGAAGGAAAAGCTAGGTGAGAGAATTACGGCCCTTCATCAGCTCGTTTCCCCATTTGGGAAGgtaataagatcctagcttattcaattaaaattaaaaaatattaaccatatacactttaacaattctttaattaattgataaattattaggcatttgtgac...
species | Glycine max |
transcript | GLYMA07G09180.3 |
intron # | 3 |
splice site | 5' |
intron type | U2 |
EST: TAGGTGAGAGAATTACGGCCCTTCATCAGCTCGTTTCCCCATTTGGGAAG ACTGACACGGCCTCTGTCTTGTTAGAAGCTATTGGGTATATCAGATTCCTTEST: gi|19348059|gb|BM892591.1|BM892591
genomic: TAGGTGAGAGAATTACGGCCCTTCATCAGCTCGTTTCCCCATTTGGGAAGgtaataagat ... acttttgcagACTGACACGGCCTCTGTCTTGTTAGAAGCTATTGGGTATATCAGATTCCTT
EST: TAGGTGAGAGAATTACGGCCCTTCATCAGCTCGTTTCCCCATTTGGGAAG ACTGACACGGCCTCTGTCTTGTTAGAAGCTATTGGGTATATCAGATTCCTTEST: gi|192312979|gb|FK004625.1|FK004625
genomic: TAGGTGAGAGAATTACGGCCCTTCATCAGCTCGTTTCCCCATTTGGGAAGgtaataagat ... acttttgcagACTGACACGGCCTCTGTCTTGTTAGAAGCTATTGGGTATATCAGATTCCTT
EST: TAGGTGAGAGAATTACGGCCCTTCATCAGCTCGTTTCCCCATTTGGGAAG ACTGACACGGCCTCTGTCTTGTTAGAAGCTATTGGGTATATCAGATTCCTTEST: gi|208239088|gb|GE037166.1|GE037166
genomic: TAGGTGAGAGAATTACGGCCCTTCATCAGCTCGTTTCCCCATTTGGGAAGgtaataagat ... acttttgcagACTGACACGGCCTCTGTCTTGTTAGAAGCTATTGGGTATATCAGATTCCTT
EST: TAGGTGAGAGAATTACGGCCCTTCATCAGCTCGTTTCCCCATTTGGGAAG ACTGACACGGCCTCTGTCTTGTTAGAAGCTATTGGGTATATCAGATTCCTTEST: gi|23053843|gb|BU577597.1|BU577597
genomic: TAGGTGAGAGAATTACGGCCCTTCATCAGCTCGTTTCCCCATTTGGGAAGgtaataagat ... acttttgcagACTGACACGGCCTCTGTCTTGTTAGAAGCTATTGGGTATATCAGATTCCTT
EST: CTTCATCAGCTCGTTTCCCCATTTGGGAAG ACTGACACGGCCTCTGTCTTGTTAGAAGCTATTGGGTATATCAGATTCCTTEST: gi|192312980|gb|FK004626.1|FK004626
genomic: CTTCATCAGCTCGTTTCCCCATTTGGGAAGgtaataagat ... acttttgcagACTGACACGGCCTCTGTCTTGTTAGAAGCTATTGGGTATATCAGATTCCTT
EST: TAGGTGAGAGAATTACGGCCCTTCATCAGCTCGTTTCCCCATTTGGGAAG ACTGACACGGCCTCTGTCTTGTTAGAAGCTATTGGGTATATCAGATTCCTTEST: gi|21677113|gb|BQ629464.1|BQ629464
genomic: TAGGTGAGAGAATTACGGCCCTTCATCAGCTCGTTTCCCCATTTGGGAAGgtaataagat ... acttttgcagACTGACACGGCCTCTGTCTTGTTAGAAGCTATTGGGTATATCAGATTCCTT
EST: TAGGTGAGAGAATTACGGCCCTTCATCAGCTCGTTTCCCCATTTGGGAAG ACTGACACGGCCTCTGTCTTGTTAGAAGCTATTGGGTATATCAGATTCCTT
genomic: TAGGTGAGAGAATTACGGCCCTTCATCAGCTCGTTTCCCCATTTGGGAAGgtaataagat ... acttttgcagACTGACACGGCCTCTGTCTTGTTAGAAGCTATTGGGTATATCAGATTCCTT
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| GTTAGGAAGGAAAAGCTAGGTGAGAGAATTACGGCCCTTCATCAGCTCGTTTCCCCATTTGGGAAGgtaataagatcctagcttattcaattaaaattaaaaaatattaaccatatacactttaacaattctttaattaattgataaattattaggcatttgtgac
- - - - - - - - - - - - - - - - - - - - TCAGCT
- - - - - - - - - - - - - - - - - - - - - CAGCTC