1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' |
GGAAAACTTCAATGATGTGTACCTTGTTTCTGAGTTAATGGACACAGATCTGCATCAAATAATACGTTCTAATCAGCAATTGACTGATGATCATTGTCGGgttagcactttaactacttttagcatatgacttttaatcatacttagttgaaagactttatagctaatgggttggttagtgtatcctcctttggctgtat...
species | Glycine max |
transcript | GLYMA07G07270.1 |
intron # | 3 |
splice site | 5' |
intron type | U2 |
EST: TGCATCAAATAATACGTTCTAATCAGCAATTGACTGATGATCATTGTCGG TATTTTCTGTATCAATTGTTACGAGGGCTCAAATATGTACATTCAGCAAATEST: gi|16996008|gb|BM085380.1|BM085380
genomic: TGCATCAAATAATACGTTCTAATCAGCAATTGACTGATGATCATTGTCGGgttagcactt ... tttgccccagTATTTTCTGTATCAATTGTTACGAGGGCTCAAATATGTACATTCAGCAAAT
EST: TGCATCAAATAATACGTTCTAATCAGCAATTGACTGATGATCATTGTCGG TATTTTCTGTATCAATTGTTACGAGGGCTCAAATATGTACATTCAGCAAATEST: gi|254328119|gb|GR835084.1|GR835084
genomic: TGCATCAAATAATACGTTCTAATCAGCAATTGACTGATGATCATTGTCGGgttagcactt ... tttgccccagTATTTTCTGTATCAATTGTTACGAGGGCTCAAATATGTACATTCAGCAAAT
EST: TGCATCAAATAATACGTTCTAATCAGCAATTGACTGATGATCATTGTCGG TATTTTCTGTATCAATTGTTACGAGGGCTCAAATATGTACATTCAGCAAATEST: gi|22522756|gb|BU081567.1|BU081567
genomic: TGCATCAAATAATACGTTCTAATCAGCAATTGACTGATGATCATTGTCGGgttagcactt ... tttgccccagTATTTTCTGTATCAATTGTTACGAGGGCTCAAATATGTACATTCAGCAAAT
EST: TGCATCAAATAATACGTTCTAATCAGCAATTGACTGATGATCATTGTCGG TATTTTCTGTATCAATTGTTACGAGGGCTCAAATATGTACATTCAGCAAATEST: gi|120530146|gb|EH258280.1|EH258280
genomic: TGCATCAAATAATACGTTCTAATCAGCAATTGACTGATGATCATTGTCGGgttagcactt ... tttgccccagTATTTTCTGTATCAATTGTTACGAGGGCTCAAATATGTACATTCAGCAAAT
EST: TGCATCAAATAATACGTTCTAATCAGCAATTGACTGATGATCATTGTCGG TATTTTCTGTATCAATTGTTACGAGGGCTCAAATATGTACATTCAGCAAATEST: gi|254315198|gb|GR830191.1|GR830191
genomic: TGCATCAAATAATACGTTCTAATCAGCAATTGACTGATGATCATTGTCGGgttagcactt ... tttgccccagTATTTTCTGTATCAATTGTTACGAGGGCTCAAATATGTACATTCAGCAAAT
EST: TGCATCAAATAATACGTTCTAATCAGCAATTGACTGATGATCATTGTCGG TATTTTCTGTATCAATTGTTACGAGGGCTCAAATATGTACATTCAGCAAATEST: gi|5127030|gb|AI748766.1|AI748766
genomic: TGCATCAAATAATACGTTCTAATCAGCAATTGACTGATGATCATTGTCGGgttagcactt ... tttgccccagTATTTTCTGTATCAATTGTTACGAGGGCTCAAATATGTACATTCAGCAAAT
EST: TGCATCAAATAATTCGTTCCAATCAGCAATTGACTGATGATCATTGTCGG TATTTTCTGTATCAATTGT-ACGAGGGCTCAAATATGTACATTCAGCAAATEST: gi|9264552|gb|BE352699.1|BE352699
genomic: TGCATCAAATAATACGTTCTAATCAGCAATTGACTGATGATCATTGTCGGgttagcactt ... tttgccccagTATTTTCTGTATCAATTGTTACGAGGGCTCAAATATGTACATTCAGCAAAT
EST: TGCATCAAATAATACGTTCTAATCAGCAATTGACTGATGATCATTGTCGG TATTTTCTGTATCAATTGTTACGAGGGCTCAAATATGTACATTCAGCAAAT
genomic: TGCATCAAATAATACGTTCTAATCAGCAATTGACTGATGATCATTGTCGGgttagcactt ... tttgccccagTATTTTCTGTATCAATTGTTACGAGGGCTCAAATATGTACATTCAGCAAAT
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| GGAAAACTTCAATGATGTGTACCTTGTTTCTGAGTTAATGGACACAGATCTGCATCAAATAATACGTTCTAATCAGCAATTGACTGATGATCATTGTCGGgttagcactttaactacttttagcatatgacttttaatcatacttagttgaaagactttatagctaatgggttggttagtgtatcctcctttggctgtat
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - gggttgg
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - cctcctt