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Data associated with selected splice site

Sequence

 atgc   intronic sequence     ATGC   exonic sequence

TAAGTTACCTGGTCGTTCACTTTCTGGATCTTTGGGTTACCAGCTAGAACCCATGTCATCTGTGACAAACCTgtaagttaatggtctcattcatcatataaccagttttatatgtattgtaattattcttacgaccatgtaaaattctgcag

Basic information

species Glycine max
transcript GLYMA07G05230.1
intron # 3
splice site 5'
intron type U2

Mapped EST sequences

Showing partial alignments of ESTs and genomic sequences. See full alignments


 ATGC     EST sequence
 ATGC     genomic sequence (exon)
 ATGC     genomic sequence (truncated intron)


EST: gi|193407175|gb|FK371066.1|FK371066
EST:     TCTGGATCTTTGGGTTACCAGCTAGAACCCATGTCATCTGTGACAAACCT                         AGACTTGAGTAACAACAACCTTGGTGGCACCATACCATACCAACTTCCTCC
genomic: TCTGGATCTTTGGGTTACCAGCTAGAACCCATGTCATCTGTGACAAACCTgtaagttaat ... aattctgcagAGACTTGAGTAACAACAACCTTGGTGGCACCATACCATACCAACTTCCTCC
EST: gi|193617299|gb|FK567517.1|FK567517
EST:     TCTGGATCTTTGGGTTACCAGCTAGAACCCATGTCATCTGTGACAAACCT                         AGACTTGAGTAACAACAACCTTGGTGGCACCATACCATACCAACTTCCTCC
genomic: TCTGGATCTTTGGGTTACCAGCTAGAACCCATGTCATCTGTGACAAACCTgtaagttaat ... aattctgcagAGACTTGAGTAACAACAACCTTGGTGGCACCATACCATACCAACTTCCTCC
EST: gi|193715037|gb|FK650202.1|FK650202
EST:     TCTGGATCTTTGGGTTACCAGCTAGAACCCATGTCATCTGTGACAAACCT                         AGACTTGAGTAACAACAACCTTGGTGGCACCATACCATACCAACTTCCTCC
genomic: TCTGGATCTTTGGGTTACCAGCTAGAACCCATGTCATCTGTGACAAACCTgtaagttaat ... aattctgcagAGACTTGAGTAACAACAACCTTGGTGGCACCATACCATACCAACTTCCTCC
EST: gi|213590529|gb|DB973302.1|DB973302
EST:     TCTGGATCTTTGGGTTACCAGCTAGAACCCATGTCATCTGTGACAAACCT                         AGACTTGAGTAACAACAACCTTGGTGGCACCATACCATACCAACTTCCTCC
genomic: TCTGGATCTTTGGGTTACCAGCTAGAACCCATGTCATCTGTGACAAACCTgtaagttaat ... aattctgcagAGACTTGAGTAACAACAACCTTGGTGGCACCATACCATACCAACTTCCTCC
EST: gi|193634847|gb|FK585266.1|FK585266
EST:     TCTGGATCTTTGGGTTACCAGCTAGAACCCATGTCATCTGTGACAAACCT                         AGACTTGAGTAACAACAACCTTGGTGGCACCATACCATACCAACTTCCTCC
genomic: TCTGGATCTTTGGGTTACCAGCTAGAACCCATGTCATCTGTGACAAACCTgtaagttaat ... aattctgcagAGACTTGAGTAACAACAACCTTGGTGGCACCATACCATACCAACTTCCTCC
EST: gi|193473755|gb|FK439696.1|FK439696
EST:     TCTGGATCTTTGGGTTACCAGCTAGAACCCATGTCATCTGTGACAAACCT                         AGACTTGAGTAACAACAACCTTGGTAGGCACCATACCATACCAACTTCCTC
genomic: TCTGGATCTTTGGGTTACCAGCTAGAACCCATGTCATCTGTGACAAACCTgtaagttaat ... aattctgcagAGACTTGAGTAACAACAACCTTGGT-GGCACCATACCATACCAACTTCCTC
EST: gi|5606215|gb|AI900313.1|AI900313
EST:     TCTGGATCTTTGGGTTACCAGCTAGAACCCATGTCATCTGTGACAAACCT                         AGACTTGAGTAACAACAACCTTGGTGGCACCATACCATACCAACTTCCTCC
genomic: TCTGGATCTTTGGGTTACCAGCTAGAACCCATGTCATCTGTGACAAACCTgtaagttaat ... aattctgcagAGACTTGAGTAACAACAACCTTGGTGGCACCATACCATACCAACTTCCTCC
EST: gi|193708511|gb|FK644959.1|FK644959
EST:     TCTGGATCTTTGGGTTACCAGCTAGAACCCATGTCATCTGTGACAAACCT                         AGACTTGAGTAACAACAACCTTGGTGGCACCATACCATACCAACTTCCTCC
genomic: TCTGGATCTTTGGGTTACCAGCTAGAACCCATGTCATCTGTGACAAACCTgtaagttaat ... aattctgcagAGACTTGAGTAACAACAACCTTGGTGGCACCATACCATACCAACTTCCTCC
EST: gi|193679135|gb|FK620629.1|FK620629
EST:     TCTGGATCTTTGGGTTACCAGCTAGAACCCATGTCATCTGTGACAAACCT                         AGACTTGAGTAACAACA-CCTTGGTGGCACCATACCATACCAACTTCCTCC
genomic: TCTGGATCTTTGGGTTACCAGCTAGAACCCATGTCATCTGTGACAAACCTgtaagttaat ... aattctgcagAGACTTGAGTAACAACAACCTTGGTGGCACCATACCATACCAACTTCCTCC