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TGTTGCTGGAATACTTGGGATTTGGCTTAGTGGAGGTGTTGCTGTTCCGCTTGCAACCAGCTATCCAGAAGTAGAGCTCTTGTATGTGATTAATAATTCGgtatgctttgaaatccctattcttgcatttgttaatcattttggatggcttgcaaactttatgaagcccaggcctccttaatcagcccttgaatttgtct...
species | Glycine max |
transcript | GLYMA07G02180.2 |
intron # | 3 |
splice site | 5' |
intron type | U2 |
EST: TTGCAACCAGCTATCCAGAAGTAGAGCTCTTGTATGTGATTAATAATTCG GATGTATCTGCAATACTGAGTACTGAGGATCATACTGAAATAATGCAAAGCEST: gi|11687559|gb|BF595235.1|BF595235
genomic: TTGCAACCAGCTATCCAGAAGTAGAGCTCTTGTATGTGATTAATAATTCGgtatgctttg ... ttggctgtagGATGTATCTGCAATACTGAGTACTGAGGATCATACTGAAATAATGCAAAGC
EST: CAGCTATCCAGAAGTAGAGCTCTTGTATGTGATTAATAATTCG GATGTATCTGCAATACTGAGTACTGAGGATCATACTGAAATAATGCAAAGCEST: gi|192295165|gb|FG986884.1|FG986884
genomic: CAGCTATCCAGAAGTAGAGCTCTTGTATGTGATTAATAATTCGgtatgctttg ... ttggctgtagGATGTATCTGCAATACTGAGTACTGAGGATCATACTGAAATAATGCAAAGC
EST: TTGCAACCAGCTATCCAGAAGTAGAGCTCTTGTATGTGATTAATAATTCG GATGTATCTGCAATACTGAGTACTGAGGATCATACTGAAATAATGCAAAGCEST: gi|37996226|gb|CF807815.1|CF807815
genomic: TTGCAACCAGCTATCCAGAAGTAGAGCTCTTGTATGTGATTAATAATTCGgtatgctttg ... ttggctgtagGATGTATCTGCAATACTGAGTACTGAGGATCATACTGAAATAATGCAAAGC
EST: TTGCAACCAGCTATCCNGAAGTAGAGCTCTTGTATGTGATTAATAATTCG GATGTATCTGCAATACTGAGTACTGAGGATCATACTGAAATAATGCAAAGCEST: gi|21889136|gb|BQ742349.1|BQ742349
genomic: TTGCAACCAGCTATCCAGAAGTAGAGCTCTTGTATGTGATTAATAATTCGgtatgctttg ... ttggctgtagGATGTATCTGCAATACTGAGTACTGAGGATCATACTGAAATAATGCAAAGC
EST: TTGCAACCAGCTATCCAGAAGTAGAGCTCTTGTATGTGATTAATAATTCG GATGTATCTGCAATACTGAGTACTGAGGATCATACTGAAATAATGCAAAGC
genomic: TTGCAACCAGCTATCCAGAAGTAGAGCTCTTGTATGTGATTAATAATTCGgtatgctttg ... ttggctgtagGATGTATCTGCAATACTGAGTACTGAGGATCATACTGAAATAATGCAAAGC
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| TGTTGCTGGAATACTTGGGATTTGGCTTAGTGGAGGTGTTGCTGTTCCGCTTGCAACCAGCTATCCAGAAGTAGAGCTCTTGTATGTGATTAATAATTCGgtatgctttgaaatccctattcttgcatttgttaatcattttggatggcttgcaaactttatgaagcccaggcctccttaatcagcccttgaatttgtct
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - AGAAGT
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - AGAGCT
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - cctcctt