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Data associated with selected splice site

Sequence

 atgc   intronic sequence     ATGC   exonic sequence

TGAGTGGTGTTCCTCATTGTGGTTGGATTCCATTCGCGAAATTGACCCAGCATTTAGACGGACAGTGATTGTTGTCTCCAAATTTGATAACCGTCTCAAGgtatgaacagtgcattttcattccaacagtaaatttgataatatatttctttagttggcttattgcttaagagatatctcatggtaagttcttgagaatt...

Basic information

species Glycine max
transcript GLYMA06G36650.1
intron # 3
splice site 5'
intron type U2

Orthologous splice sites


 atgc   intronic sequence     ATGC   exonic sequence


upper sequence: GLYMA06G36650.1 (Glycine max), 5'ss of exon 3
lower sequence: Vv19s0014g02500.t01 (Vitis vinifera), 5'ss of exon 4
TGAGTGGTGTTCCTCATTGTGGTTGGATTCCATTCGCGAAATTGACCCAGCATTTAGACGGACAGTGATTGTTGTCTCCAAATTTGATAACCGTCTCAAGgtatgaacagtgcatt--ttcattccaacagtaaatttgataatatatttctttagttggcttattgcttaagagatatctcatggtaagttcttgagaatt
||| |||||||| || |||||||||||| || |||| |||||||| ||| | |  ||||||||||| || ||||| |||||||||||||| || ||||||||||     |   | |  | || |  | |   ||     | ||| | | | || |    | |||   |  || | ||  | |||   || |  ||||     
TGAATGGTGTTCATCGTTGTGGTTGGATGCCGTTCGGGAAATTGATCCAACCTACAGACGGACAGTAATCGTTGTTTCCAAATTTGATAATCGGCTCAAGgtatatgtggaagactactccagttaatcttcaagaacta-aatttgtgttttgatggagattaacacagaacacatgacacata-caattaattgaatgca