1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' |
CTCAAAGCACCGGGACCTGGCTATACTTGTGGTCCTGCCAAAGTTGTGAAACCAACTGTATTTATTACCAATGACAAGAGGAGAACCACCCAAGCCATGAgtaagttagttgaaagttacattgaattaatcaaaactgtttacatattcatttgtcttttctaaactttcttgataataccaacatgtagttataagat...
species | Glycine max |
transcript | GLYMA06G22410.1 |
intron # | 3 |
splice site | 5' |
intron type | U2 |
EST: ACCAACTGTATTTATTACCAATGACAAGAGGAGAACCACCCAAGCCATGA TGACCTGGAATATTACCTGCACTTATTCTCAATTCCTGGCTCAAAAGGCACEST: gi|7925487|gb|AW831513.1|AW831513
genomic: ACCAACTGTATTTATTACCAATGACAAGAGGAGAACCACCCAAGCCATGAgtaagttagt ... tttgtcacagTGACCTGGAATATTACCTGCACTTATTCTCAATTCCTGGCTCAAAAGGCAC
EST: ACCAACTGTATTTATTACCAATGACAAGAGGAGAACCACCCAAGCCATGA TGACCTGGAATATTACCTGCACTTATTCTCAATTCCTGGCTCAAAAGGCAC
genomic: ACCAACTGTATTTATTACCAATGACAAGAGGAGAACCACCCAAGCCATGAgtaagttagt ... tttgtcacagTGACCTGGAATATTACCTGCACTTATTCTCAATTCCTGGCTCAAAAGGCAC
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| CTCAAAGCACCGGGACCTGGCTATACTTGTGGTCCTGCCAAAGTTGTGAAACCAACTGTATTTATTACCAATGACAAGAGGAGAACCACCCAAGCCATGAgtaagttagttgaaagttacattgaattaatcaaaactgtttacatattcatttgtcttttctaaactttcttgataataccaacatgtagttataagat
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - AAGAGG
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - AGAGGA
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - GAGGAG
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - AGGAGA
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - GGAGAA