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Data associated with selected splice site

Sequence

 atgc   intronic sequence     ATGC   exonic sequence

TGGCCTTTTAGCTGGACCTAATGCTGGGTTTGGTTACACTAACAATTTTATACTGCCTAATAACTATGGAAATACTAATGGCCAAACTAACAACAGAAGGgtatgacttatgagtaattatttggtttgatttctattcacttttttttcttaatgcaatgttgtgtgctacag

Basic information

species Glycine max
transcript GLYMA06G14050.1
intron # 3
splice site 5'
intron type U2

Mapped EST sequences

Showing partial alignments of ESTs and genomic sequences. See full alignments


 ATGC     EST sequence
 ATGC     genomic sequence (exon)
 ATGC     genomic sequence (truncated intron)


EST: gi|254324020|gb|GR840445.1|GR840445
EST:     ACTGCCTAATAACTATGGGAAATACTAATGGCCAAACTAACAACAGAAGG                         AG-AAGAATGGCTATAATCCCGGGAAGCGAAGAATGA-TCATAAAA
genomic: ACTGCCTAATAACTATGG-AAATACTAATGGCCAAACTAACAACAGAAGGgtatgactta ... tgtgctacagAGGAAGAATGGCTATAATCCCGGGAAGCGAAGAATGAATCATAAAA
EST: gi|151399022|gb|EV268893.1|EV268893
EST:     TACTGCCTAATAACTATGGAAATACTAATGGCCAAACTAACAACAGAAG-                         AGGAAGAATGGCTATAATCCCGGGAAGCGAAGA-TGA-TCATAAAATGGAT
genomic: TACTGCCTAATAACTATGGAAATACTAATGGCCAAACTAACAACAGAAGGgtatgactta ... tgtgctacagAGGAAGAATGGCTATAATCCCGGGAAGCGAAGAATGAATCATAAAATGGAT
EST: gi|254343883|gb|GR857639.1|GR857639
EST:     TACTGCCTAATAACTATGGAAATACTAATGGCCAAACTAACAACAGAAGG                         AGGAAGAATGGCTATAATCCCGGGAAGCGAAGAATGAATCATAAAATGGAT
genomic: TACTGCCTAATAACTATGGAAATACTAATGGCCAAACTAACAACAGAAGGgtatgactta ... tgtgctacagAGGAAGAATGGCTATAATCCCGGGAAGCGAAGAATGAATCATAAAATGGAT